>Osa02LNT0476300.1

AATGTATGACACTGTTGACTTTTTATCCAACGTTTGACCATTCGTCTTATTCAAAAAATTTATACAATTATCATTTATTTTATTGTGACTTGATTCATCATCAAATGTTCTTTAAGCATGATATAAATATTTTCATATTTGAACGAAAATTTTGAATAAAACAATGGTCCAACGTTGATCGAAAAGTCAACGGCGTTATACATT

Explanation	CPC Score
noncoding (weak)	-0.880367

Transcript ID	Chromosome	Locus	Ref	Alt

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa02LNT0476300.1	osa-miR812s	Translation	3.5	9.311	1	24
Osa02LNT0476300.1	osa-miR5799	Translation	2.0	9.311	1	24
Osa02LNT0476300.1	osa-miR5824	Cleavage	5.0	8.906	1	24
Osa02LNT0476300.1	osa-miR166l-5p	Translation	4.0	13.972	1	21
Osa02LNT0476300.1	osa-miR443	Translation	4.0	12.536	1	22
Osa02LNT0476300.1	osa-miR812a	Cleavage	2.5	7.839	1	22
Osa02LNT0476300.1	osa-miR812b	Cleavage	2.5	7.839	1	22
Osa02LNT0476300.1	osa-miR812c	Cleavage	2.5	7.839	1	22
Osa02LNT0476300.1	osa-miR812d	Cleavage	2.5	7.839	1	22
Osa02LNT0476300.1	osa-miR812e	Cleavage	2.5	7.839	1	22
Osa02LNT0476300.1	osa-miR812g	Translation	4.0	9.311	1	24
Osa02LNT0476300.1	osa-miR812h	Translation	4.0	9.311	1	24
Osa02LNT0476300.1	osa-miR812i	Translation	4.0	9.311	1	24
Osa02LNT0476300.1	osa-miR812j	Translation	4.0	9.311	1	24
Osa02LNT0476300.1	osa-miR812k	Cleavage	4.0	8.862	1	24
Osa02LNT0476300.1	osa-miR812l	Cleavage	4.0	8.862	1	24
Osa02LNT0476300.1	osa-miR812m	Cleavage	4.0	8.862	1	24
Osa02LNT0476300.1	osa-miR812o-3p	Cleavage	4.0	9.53	1	24

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa02LNT0476300.1	2	d50	Morphological trait	Dwarf	nan	nan
Osa02LNT0476300.1	2	qPH-2	Morphological trait	Dwarf	RG324	RG83
Osa02LNT0476300.1	2	np2.2	Morphological trait	Culm/leaf	RM324	RM262
Osa02LNT0476300.1	2	qSS-2	Physiological trait	Sterility	RM301	RM263
Osa02LNT0476300.1	2	nan	Resistance or Tolerance	Drought tolerance	RG83	RG171

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus