>Osa05LNT0310000.1

AATGTATGATATCGTTGACTTTTCGCATAAAGTTTGACCATTTGTCTTATTCAAAAAATTATATAAATATCATTTATTTTGTTGTGACTTGTTTTATCATCAAAGAAACTATAATCTTAACTTATACTTTTTCACATTTATACTAAATTTGTGAATAAGATGAACGGTTAAACGTTATGCGAAAAGTCAATGACGTCATACATT

Explanation	CPC Score
noncoding (weak)	-0.997658

Transcript ID	Chromosome	Locus	Ref	Alt

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa05LNT0310000.1	osa-miR5540	Translation	5.0	12.479	1	21
Osa05LNT0310000.1	osa-miR5799	Translation	3.5	10.236	1	24
Osa05LNT0310000.1	osa-miR443	Translation	4.5	9.453	1	22

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa05LNT0310000.1	5	nan	Morphological trait	Seed	RG13	RG573
Osa05LNT0310000.1	5	qNBL-5	Resistance or Tolerance	Blast resistance	RZ649	RZ225
Osa05LNT0310000.1	5	QPl5	Morphological trait	Panicle/flower	RG13	RG346
Osa05LNT0310000.1	5	nan	Morphological trait	Seed	RM163	RM31
Osa05LNT0310000.1	5	nan	Morphological trait	Seed	RM163	RM31
Osa05LNT0310000.1	5	nan	Physiological trait	Eating quality	RM163	RM31

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus