>Osa06LNT0496800.1

AATATTTGACTCCGTTGACTTTTTCAAACATGTTTAACCGTTCGTCTTATTCAAAAAATTTAAGTAATTATTAATTCTTTTCATATCATTTGATTTATTGTTAAATATACTTTTATGTATACATATAGTTTTACATCTTTTACAAAAGTTTTTGAATAAGATGAACGGTTAAATATGTTTGAAAAAGTCAACGGCGTTAAATATT

Explanation	CPC Score
noncoding	-1.30114

Transcript ID	Chromosome	Locus	Ref	Alt

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa06LNT0496800.1	osa-miR812a	Cleavage	3.0	6.755	1	22
Osa06LNT0496800.1	osa-miR812b	Cleavage	3.0	6.755	1	22
Osa06LNT0496800.1	osa-miR812c	Cleavage	3.0	6.755	1	22
Osa06LNT0496800.1	osa-miR812d	Cleavage	3.0	6.755	1	22
Osa06LNT0496800.1	osa-miR812e	Cleavage	3.0	6.755	1	22
Osa06LNT0496800.1	osa-miR812k	Cleavage	5.0	6.537	1	24
Osa06LNT0496800.1	osa-miR812l	Cleavage	5.0	6.537	1	24
Osa06LNT0496800.1	osa-miR812m	Cleavage	5.0	6.537	1	24

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa06LNT0496800.1	6	Lhd1(t)	Physiological trait	Flowering	nan	nan
Osa06LNT0496800.1	6	En-Se1	Physiological trait	Flowering	nan	nan
Osa06LNT0496800.1	6	Hd3a	Physiological trait	Flowering	nan	nan
Osa06LNT0496800.1	6	alk6-1	Physiological trait	Eating quality	RM190	RM253
Osa06LNT0496800.1	6	hr6	Physiological trait	Eating quality	RM190	RM253
Osa06LNT0496800.1	6	d4	Morphological trait	Dwarf	nan	nan
Osa06LNT0496800.1	6	nan	Resistance or Tolerance	Drought tolerance	RM170	RM204
Osa06LNT0496800.1	6	nan	Morphological trait	Shoot/Seedling	OSR19	RM225
Osa06LNT0496800.1	6	Qbph6	Resistance or Tolerance	Insect resistance	RM510	RM314
Osa06LNT0496800.1	6	AsTol	Resistance or Tolerance	Other soil stress tolerance	RZ516	RG213

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus