>Osa01LNT0455800.1

CCTCCATATTTTAATGTATGACACCGTTGATTTTTTATTCAACGTTTGACCATTCGTCTTATTTAAAAGATTTATGTAATTATCATTTATTTTATTATGATTTGATTCATCGTTAAATGTTCTTTAAACATGACATAAATATTTTTATATTTGTACAAAATTTTTAAATAAAACGAATGATTAAATGTTGGTCAAAAAGTCAACGGTGTCATACATTTAAAATACGGAGA

Explanation	CPC Score
noncoding	-1.29354

Transcript ID	Chromosome	Locus	Ref	Alt

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa01LNT0455800.1	osa-miR812s	Translation	3.5	13.298	1	24
Osa01LNT0455800.1	osa-miR5799	Translation	2.0	13.298	1	24
Osa01LNT0455800.1	osa-miR443	Translation	4.5	12.239	1	22
Osa01LNT0455800.1	osa-miR812a	Cleavage	2.5	11.748	1	22
Osa01LNT0455800.1	osa-miR812b	Cleavage	2.5	11.748	1	22
Osa01LNT0455800.1	osa-miR812c	Cleavage	2.5	11.748	1	22
Osa01LNT0455800.1	osa-miR812d	Cleavage	2.5	11.748	1	22
Osa01LNT0455800.1	osa-miR812e	Cleavage	2.5	11.748	1	22
Osa01LNT0455800.1	osa-miR812g	Translation	4.0	13.298	1	24
Osa01LNT0455800.1	osa-miR812h	Translation	4.0	13.298	1	24
Osa01LNT0455800.1	osa-miR812i	Translation	4.0	13.298	1	24
Osa01LNT0455800.1	osa-miR812j	Translation	4.0	13.298	1	24
Osa01LNT0455800.1	osa-miR812o-3p	Cleavage	4.5	13.625	1	24

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa01LNT0455800.1	1	nan	Physiological trait	Source activity	RG532	RM472
Osa01LNT0455800.1	1	rfw1b	Resistance or Tolerance	Drought tolerance	C813	C955
Osa01LNT0455800.1	1	nan	Morphological trait	Root	RM23	RM306
Osa01LNT0455800.1	1	nan	Resistance or Tolerance	Salinity tolerance	RM1	R886
Osa01LNT0455800.1	1	nan	Resistance or Tolerance	Salinity tolerance	RM1	R886
Osa01LNT0455800.1	1	nan	Resistance or Tolerance	Salinity tolerance	RM1	RM5

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus