>Osa06LNT0508700.1

CATATTTTAATATATGACGCCGTTGACTTTTTATCCAACGTTTGACCATTCATCTTATTCAAAAAATTTACGCAATTGTCCTTTATTTTATTGTGACTAGATTCATCATCAAATGTTATTTAAGCATGATATAAATATTTTCATATTTGCACGAAAATTTTGAATAAAACGAATGGTCAAACATTAATCAAAAAGTCAACGGCGTTATACATTAAAATACG

Explanation	CPC Score
noncoding	-1.28538

Transcript ID	Chromosome	Locus	Ref	Alt

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa06LNT0508700.1	osa-miR812s	Translation	5.0	6.966	1	24
Osa06LNT0508700.1	osa-miR5799	Translation	3.5	6.966	1	24
Osa06LNT0508700.1	osa-miR5824	Cleavage	5.0	10.172	1	24
Osa06LNT0508700.1	osa-miR812a	Cleavage	4.0	6.992	1	22
Osa06LNT0508700.1	osa-miR812b	Cleavage	4.0	6.992	1	22
Osa06LNT0508700.1	osa-miR812c	Cleavage	4.0	6.992	1	22
Osa06LNT0508700.1	osa-miR812d	Cleavage	4.0	6.992	1	22
Osa06LNT0508700.1	osa-miR812e	Cleavage	4.0	6.992	1	22
Osa06LNT0508700.1	osa-miR1875	Cleavage	3.5	16.334	1	24
Osa06LNT0508700.1	osa-miR812o-3p	Cleavage	4.0	8.879	1	24

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa06LNT0508700.1	6	ph6	Morphological trait	Dwarf	RZ667	RG653
Osa06LNT0508700.1	6	qLDLJ-6-1,2,3	Physiological trait	Source activity	RM217	RM3
Osa06LNT0508700.1	6	gw6	Morphological trait	Panicle/flower	RG424	R2549
Osa06LNT0508700.1	6	RPLD4	Physiological trait	Eating quality	RG424	RG172
Osa06LNT0508700.1	6	nan	Physiological trait	Eating quality	RM253	RM162
Osa06LNT0508700.1	6	amy6-1	Physiological trait	Eating quality	RM3	RM217
Osa06LNT0508700.1	6	asv6-1	Physiological trait	Eating quality	RM3	RM217
Osa06LNT0508700.1	6	tgw6.1	Physiological trait	Source activity	RG264	RM3

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus