>Osa03LNT0464500.1

GAACTCTAATGAAGACAAACTTTATATTTAACTTATAGCCCTCGACGCGATCTACAACTTTGTAGTTGATTTTTTTTATTTATAAGTCATTTTTTTCCCAAAATGTAATTTTAAAATTAAAATTTCAAAATCTATAAACATGCAACAATATTTTGGGACCCTAAACAGTTTTAATTCAAAAACTTTTCAATTACAAAGTTGTAGCTCGCGTCGAGGGCTACAATTTTGATATAAAGTTTGTCTTTATTAGAGTTC

Explanation	CPC Score
noncoding	-1.18326

Transcript ID	Chromosome	Locus	Ref	Alt

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts
Osa03LNT0464500.1	DTM_#DNAt_MULE_japo_Os0089	Chr3	-	9147911	9148660	254

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa03LNT0464500.1	osa-miR1877	Cleavage	4.5	16.282	1	24

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa03LNT0464500.1	3	S34(t)	Physiological trait	Sterility	nan	nan
Osa03LNT0464500.1	3	qGW3	Morphological trait	Seed	C706	C12534S
Osa03LNT0464500.1	3	qOE3-1	Physiological trait	Eating quality	nan	nan
Osa03LNT0464500.1	3	qTA3	Physiological trait	Eating quality	nan	nan
Osa03LNT0464500.1	3	qGY-3	Morphological trait	Seed	RG369	RG745
Osa03LNT0464500.1	3	gl3a	Morphological trait	Panicle/flower	C63	RM232
Osa03LNT0464500.1	3	qBM-3	Physiological trait	Source activity	RG369	RG745

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus