>Osa02LNT0481700.1

GAACTCTAATGAAGACAAACTTTATATCAAAATTGTAGCCCTCGACGCGACCTACAACTTTGTAGTTGAAAAGTTTTTGAATTAAAACTGTTTAGGGTCCCAAAATATTGTTGCATGTTTATAGATTTTGCAATTTTGATTTTAAAATTACATTTTGGGACAAAAAATGACTTAAAATAAAAAAAATTCAACTACAAAGTTGTAGATCGTGTTGAGGGCTACAAGTTTGATATAAAGTTTATCTTCATTAGAGTTC

Explanation	CPC Score
noncoding	-1.13043

Transcript ID	Chromosome	Locus	Ref	Alt

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts
Osa02LNT0481700.1	DTM_#DNAt_MULE_japo_Os0089	Chr2	-	32785955	32786698	255

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa02LNT0481700.1	osa-miR167a-5p	Translation	5.0	15.345	1	21
Osa02LNT0481700.1	osa-miR167b	Translation	5.0	15.345	1	21
Osa02LNT0481700.1	osa-miR167c-5p	Translation	5.0	15.345	1	21
Osa02LNT0481700.1	osa-miR167d-5p	Translation	5.0	15.345	1	21
Osa02LNT0481700.1	osa-miR167e-5p	Translation	5.0	15.345	1	21
Osa02LNT0481700.1	osa-miR167f	Translation	5.0	15.345	1	21
Osa02LNT0481700.1	osa-miR167g	Translation	5.0	15.345	1	21
Osa02LNT0481700.1	osa-miR167h-5p	Translation	5.0	15.345	1	21
Osa02LNT0481700.1	osa-miR167i-5p	Translation	5.0	15.345	1	21
Osa02LNT0481700.1	osa-miR167j	Translation	5.0	15.345	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa02LNT0481700.1	2	Hd7	Physiological trait	Flowering	R3393	R2511
Osa02LNT0481700.1	2	ss2	Physiological trait	Source activity	RM240	RM213
Osa02LNT0481700.1	2	sk1(t)	Morphological trait	Seed	nan	nan
Osa02LNT0481700.1	2	nan	Morphological trait	Seed	C747	C1445
Osa02LNT0481700.1	2	qCHR-2	Others	Others	RM263	RG520
Osa02LNT0481700.1	2	qDLR2-1	Resistance or Tolerance	Other soil stress tolerance	RM525	RM406
Osa02LNT0481700.1	2	qDLR2-1	Resistance or Tolerance	Other soil stress tolerance	RM525	RM406

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus