Transcript

Sequence

>Osa10LNT0573900.1

GACTTTAAATGGGAAAGCCATAAACAGCTAACTTGTACAGCTAATCAAGATCTACAACTTTTATTTTGGTCACTTCTTCATCTGACAAAGTGATAGTACCAATGTTTACAAAATTGACATATCTGTGTTGATATTTATAAACCAGATGAGAGAAATGTGATTTTTGTGAATAATATAACTATCACTTTGTCGGATGAAGAAGTAACCAAAATAAAAGTTGTAGATCTTGATGAGAGGATCAACTTTGTTGTTGACCATATTTCCATTTGAAATC

Coding Potentia

Explanation	CPC Score
noncoding (weak)	-0.00939712

Genome Browser

Expression

Axis x: Treatment
Axis y: FPKM
Value above bar: Standard deviation

Variation

Transcript ID	Chromosome	Locus	Ref	Alt

Transposon

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

small RNA targets

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End

QTL

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa10LNT0573900.1	10	Phyllochron	Morphological trait	Culm/leaf	R1629	R2447
Osa10LNT0573900.1	10	ssd10	Morphological trait	Panicle/flower	RG257	RZ583
Osa10LNT0573900.1	10	nan	Physiological trait	Sterility	C701	C16
Osa10LNT0573900.1	10	nan	Resistance or Tolerance	Other soil stress tolerance	R1629	R2447
Osa10LNT0573900.1	10	nan	Resistance or Tolerance	Drought tolerance	RZ892	BCD386
Osa10LNT0573900.1	10	qSPB2-1	Morphological trait	Panicle/flower	C1633	RM239
Osa10LNT0573900.1	10	qSPBp10-2	Morphological trait	Panicle/flower	C1633	RM239

pre-miRNA

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

GWAS

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus