Transcript

Sequence

>Osa08LNT0551500.1

GATTTCAACTGAAAAAGTCATCAACAACAAAGTTGTATAACTCATCAATATCTATAATTTTTATTTTGGTCATTTCTTCATCTGACAAAGTGATAGTAAAATTGTTCAAAAAATTACATATCTCTCTTATAGTTTATAAACTATATAAGAGATATGTTTATCACTTTCTCGGATGAAGAAATGACCCAAGTAAAAGTTTTATATATTGATGAGTTATACAACTTTGTTGTTGATGACATTTTCAGTTGAAGTC

Coding Potentia

Explanation	CPC Score
noncoding (weak)	-0.878016

Genome Browser

Expression

Axis x: Treatment
Axis y: FPKM
Value above bar: Standard deviation

Variation

Transcript ID	Chromosome	Locus	Ref	Alt

Transposon

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

small RNA targets

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End

QTL

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa08LNT0551500.1	8	hd8	Physiological trait	Flowering	RZ562	RG978
Osa08LNT0551500.1	8	dth8	Physiological trait	Flowering	RG333	RZ66
Osa08LNT0551500.1	8	hsa2(t)	Physiological trait	Sterility	nan	nan
Osa08LNT0551500.1	8	qALRR-8	Resistance or Tolerance	Other soil stress tolerance	RG978	C1121
Osa08LNT0551500.1	8	nan	Resistance or Tolerance	Drought tolerance	RM72	RM331
Osa08LNT0551500.1	8	qDSR 8	Resistance or Tolerance	Other soil stress tolerance	RM3572	RM404

pre-miRNA

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore
Osa08LNT0551500.1	osa-MIR821b	79.412	272	10	281	2.92e-43	172

GWAS

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus