>Osa03LNT0469500.1

GATTTCAACTGAAAAAGTCATCAACAACAAAGTTGTATAACTCATCAAGATATATAACTTCTATTTTAGTTATTTCTTTATCCGATAAAGTTATTTATAAGATTGTTCACAAAATGTACATCTCTCTGATATTTTTATAAACTATATATTTTTTATAAACTATATGATATGCACATTTCGTGAACAATCTTACAAATCACTTTATCGGATGAATAAATGATCAAAATAAAAGTTATAGATCTTGTTGATTTATACAACTTTGTTATTGATGACTTTTTCAGTTGAAATC

Explanation	CPC Score
noncoding	-1.18224

Transcript ID	Chromosome	Locus	Ref	Alt

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa03LNT0469500.1	3	nan	Morphological trait	Panicle/flower	RZ448	RZ403
Osa03LNT0469500.1	3	nan	Physiological trait	Eating quality	RZ403	R19
Osa03LNT0469500.1	3	An5(t)	Morphological trait	Panicle/flower	C1677	R19
Osa03LNT0469500.1	3	nan	Resistance or Tolerance	Blast resistance	RM16	RM168
Osa03LNT0469500.1	3	gw3.1	Morphological trait	Seed	RZ672	RZ474
Osa03LNT0469500.1	3	nan	Resistance or Tolerance	Insect resistance	G332	R19
Osa03LNT0469500.1	3	qGL-3	Morphological trait	Seed	R19	C1677
Osa03LNT0469500.1	3	qLWR-3	Morphological trait	Seed	R19	C1677
Osa03LNT0469500.1	3	n-p3	Resistance or Tolerance	Other soil stress tolerance	RZ403	R19
Osa03LNT0469500.1	3	qSV-3-1	Morphological trait	Shoot/Seedling	RM156	RM168
Osa03LNT0469500.1	3	qSV-3-1	Morphological trait	Shoot/Seedling	RM156	RM168
Osa03LNT0469500.1	3	Yd3-13	Morphological trait	Seed	RZ403	CDO337
Osa03LNT0469500.1	3	nan	Morphological trait	Shoot/Seedling	RZ403	RZ630
Osa03LNT0469500.1	3	nan	Morphological trait	Shoot/Seedling	RZ452	RZ448
Osa03LNT0469500.1	3	gw3a	Morphological trait	Seed	R19	RZ403

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore
Osa03LNT0469500.1	osa-MIR821b	78.767	292	7	281	6.27e-45	178

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus