>Osa07LNT0530100.1

GATTTCAACTGAAAAAGTCATCAACAACAAAGTTGTATAACTCATCAAGATCTATACCTTTTATTTCAGTCATTTCTTCATCCGACAAAGTGATAGTAACATTGTTCACAAAATTTACATATCTCTCATTTGGTTTTATAAACTATAAGAGATAAGATATGTAAATTTTGTGAACAATGTTATAATCACATTGTTGGATGAAGAAATGATCAAAATAAAAGTTGTACGTCTTGATGAGTTCTACAATTTTATGTTCATGATTTTTTTCACCTGAAATT

Explanation	CPC Score
noncoding	-1.12216

Transcript ID	Chromosome	Locus	Ref	Alt

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa07LNT0530100.1	7	qLTG-7	Resistance or Tolerance	Cold tolerance	R1440	R1357
Osa07LNT0530100.1	7	qLTG-7	Physiological trait	Germination/dormancy	R1440	R1357
Osa07LNT0530100.1	7	QRl7	Morphological trait	Culm/leaf	CDO497	CDO385
Osa07LNT0530100.1	7	dth7.1	Physiological trait	Flowering	RM125	RM336
Osa07LNT0530100.1	7	sp2(t)	Morphological trait	Panicle/flower	nan	nan
Osa07LNT0530100.1	7	nan	Resistance or Tolerance	Insect resistance	RG773	CDO59
Osa07LNT0530100.1	7	qHd-7	Physiological trait	Flowering	RM125	RM432

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore
Osa07LNT0530100.1	osa-MIR821a	84.229	279	1	273	4.45e-71	265
Osa07LNT0530100.1	osa-MIR821b	82.437	279	8	281	1.02e-62	237

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus