>Osa07LNT0529400.1

GATTTCAACTGAAAAAGTCATCAATAACAAAGTTGTATAATCTATCTGGATCTACAATTTTTATTTTGGTCATTTATTAATCCGACAAATTGATAGTATGATTGTTCATAAAATTTACATATCTCTTATATGGTGTTATAAACTATAAGAGAGATTTGTAAATTTTGTGAACAATGTTACTATTACTTTGCCAGATGAAGATATGACCAAAATAAAAATTGTAGATCCAGATAGATTATACAACTTTGTTGTTGATGACTTTTTCAGTTGAAGTC

Explanation	CPC Score
noncoding (weak)	-0.11634

Transcript ID	Chromosome	Locus	Ref	Alt

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa07LNT0529400.1	osa-miR821a	Cleavage	1.0	13.954	1	24
Osa07LNT0529400.1	osa-miR821a	Translation	5.0	12.219	1	24
Osa07LNT0529400.1	osa-miR821b	Cleavage	1.0	13.954	1	24
Osa07LNT0529400.1	osa-miR821b	Translation	5.0	12.219	1	24
Osa07LNT0529400.1	osa-miR821c	Cleavage	1.0	13.954	1	24
Osa07LNT0529400.1	osa-miR821c	Translation	5.0	12.219	1	24

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa07LNT0529400.1	7	QRl7	Morphological trait	Culm/leaf	CDO497	CDO385
Osa07LNT0529400.1	7	dth7.1	Physiological trait	Flowering	RM125	RM336
Osa07LNT0529400.1	7	sp2(t)	Morphological trait	Panicle/flower	nan	nan
Osa07LNT0529400.1	7	nan	Resistance or Tolerance	Insect resistance	RG773	CDO59
Osa07LNT0529400.1	7	qHd-7	Physiological trait	Flowering	RM125	RM432
Osa07LNT0529400.1	7	qLTG-7	Resistance or Tolerance	Cold tolerance	R1440	R1357
Osa07LNT0529400.1	7	qLTG-7	Physiological trait	Germination/dormancy	R1440	R1357

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore
Osa07LNT0529400.1	osa-MIR821b	79.853	273	7	277	1.73e-50	196

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus