>Osa10LNT0571500.1

GACTTCAACTGAAAAAGTCATCAACAACAAAGTTATATAATCCATCAAGAACTATAATTTTTATTTTGGTCATTTCTTCATCCGATAAAGTGATAGTAACATTGTTCACAAATTTTACATATCTCCCATATGGTTTTATAAATTATAAGAGAGGCTGTGTAAATTCTGTGAACAATGTTACTATCACTTTATCGGATAAAGAAATAACCAAAATAAAAGTTATAGATATTGATGAGTTATACAACTTTGTTGTTGATGACCTTTTCAGTTGAAATA

Explanation	CPC Score
noncoding (weak)	-0.0813905

Transcript ID	Chromosome	Locus	Ref	Alt

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa10LNT0571500.1	osa-miR5157a-5p	Cleavage	4.5	13.262	1	24
Osa10LNT0571500.1	osa-miR5157b-5p	Cleavage	4.5	13.262	1	24
Osa10LNT0571500.1	osa-miR5162	Cleavage	5.0	9.651	1	24

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa10LNT0571500.1	10	nan	Resistance or Tolerance	Other stress resistance	R1933	R1629
Osa10LNT0571500.1	10	nan	Resistance or Tolerance	Other stress resistance	R1933	R1629
Osa10LNT0571500.1	10	qRRE-10	Resistance or Tolerance	Other soil stress tolerance	R2174	R2194
Osa10LNT0571500.1	10	qPBN-10	Morphological trait	Panicle/flower	RM216	RM311
Osa10LNT0571500.1	10	nan	Physiological trait	Sterility	R2309	RG257
Osa10LNT0571500.1	10	nan	Physiological trait	Sterility	C701	C16

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore
Osa10LNT0571500.1	osa-MIR821a	83.636	275	5	274	3.46e-67	252
Osa10LNT0571500.1	osa-MIR821b	82.657	271	8	277	2.83e-63	239

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus