>Osa06LNT0509100.1

GATTTCAACTGAAAAAGTTATCAACAACAAAGTTGAATAACTCATCAAGATCTAAAACTTTTATTTTGGTCATTTCTTCATCTGATAAAATATTAGTAACATTGTTCACAAATTTTACATATATGTGTTATAGTTTATAAAATTAGATAAGAGATATGTCAATTTTGTGAACAATATTATTATCACTTTATCAGATGAAGAAATGACCAAAATAAAAGTTTTAGATCTTGATGAGTTATTCAACTTTGTTGTTGATAACGTTTTCAGTTGAAATT

Explanation	CPC Score
noncoding (weak)	-0.0365001

Transcript ID	Chromosome	Locus	Ref	Alt

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa06LNT0509100.1	osa-miR2092-5p	Translation	4.5	14.801	1	21
Osa06LNT0509100.1	osa-miR5162	Cleavage	5.0	14.811	1	24

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa06LNT0509100.1	6	RPLD4	Physiological trait	Eating quality	RG424	RG172
Osa06LNT0509100.1	6	nan	Physiological trait	Eating quality	RM253	RM162
Osa06LNT0509100.1	6	amy6-1	Physiological trait	Eating quality	RM3	RM217
Osa06LNT0509100.1	6	asv6-1	Physiological trait	Eating quality	RM3	RM217
Osa06LNT0509100.1	6	tgw6.1	Physiological trait	Source activity	RG264	RM3
Osa06LNT0509100.1	6	ph6	Morphological trait	Dwarf	RZ667	RG653
Osa06LNT0509100.1	6	qLDLJ-6-1,2,3	Physiological trait	Source activity	RM217	RM3
Osa06LNT0509100.1	6	gw6	Morphological trait	Panicle/flower	RG424	R2549

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore
Osa06LNT0509100.1	osa-MIR821a	91.513	271	5	274	2.55e-103	372
Osa06LNT0509100.1	osa-MIR821c	91.011	267	1	266	1.92e-99	359

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus