>Osa03LNT0214300.1

GATATCAACTGAAAAAGTCATCAACAACAAAGTTGAATAACTCATCAAGATTTAAAACTTTTATTTTGGTCATTTCTTCATACGACAAAGTGACAGTAACATTGTTCACAAAATTAACATATCTCTTGTCTGGTTTTATAAACTATAACACATATATGTAAAATTTGTGAATAATATTGCTAACATTTTATCGGATGAAGAAATAACAAAAATAAAAGTTCTAGATCTTGATGAGTTATTCAACTTTGTTGTTGATGACTTTTTCAATTGAAATC

Explanation	CPC Score
noncoding (weak)	-0.965352

Transcript ID	Chromosome	Locus	Ref	Alt

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa03LNT0214300.1	osa-miR821a	Cleavage	1.0	14.697	1	24
Osa03LNT0214300.1	osa-miR821b	Cleavage	1.0	14.697	1	24
Osa03LNT0214300.1	osa-miR821c	Cleavage	1.0	14.697	1	24
Osa03LNT0214300.1	osa-miR5162	Cleavage	5.0	7.89	1	24

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa03LNT0214300.1	3	nan	Physiological trait	Eating quality	RZ574	RZ284
Osa03LNT0214300.1	3	ccf3b	Physiological trait	Source activity	RM16	RM282
Osa03LNT0214300.1	3	ccfs3	Physiological trait	Source activity	RM16	RM282
Osa03LNT0214300.1	3	nan	Resistance or Tolerance	Other stress resistance	RM4512	RM8208
Osa03LNT0214300.1	3	nan	Resistance or Tolerance	Other stress resistance	RM4512	RM8208
Osa03LNT0214300.1	3	qGL3-1	Physiological trait	Eating quality	nan	nan
Osa03LNT0214300.1	3	qOE3-1	Physiological trait	Eating quality	nan	nan
Osa03LNT0214300.1	3	qTA3	Physiological trait	Eating quality	nan	nan

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore
Osa03LNT0214300.1	osa-MIR821a	95.273	275	1	274	3.2e-122	435
Osa03LNT0214300.1	osa-MIR821b	93.091	275	7	281	9.5e-113	403
Osa03LNT0214300.1	osa-MIR821c	94.382	267	1	266	1.88e-114	409

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus