>Osa08LNT0555900.1

GATATCAACTGAAAAAGTCATCAACAACAAAGTTGAATAACTCATCAAGATCTAAAACTTTTATTTTGGTCATTTCTTCATACGACAAAGTGATAGTAACATTGTTCACAAAATTGACATATCTCTTATCTGGTTTTATAAACTATAACACATATATGTAAAATTTGTGAATAATATTAATAACGTTTCGTCGGATGAAGAAATAACAAAAATAAAAGTTTTAGACCTTGATGAGTTATTCAACTTTGTTGTTGATGACTTTTTCAGTTGATATC

Explanation	CPC Score
noncoding (weak)	-0.126341

Transcript ID	Chromosome	Locus	Ref	Alt

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa08LNT0555900.1	osa-miR821a	Cleavage	1.0	14.687	1	24
Osa08LNT0555900.1	osa-miR821a	Translation	4.5	6.647	1	24
Osa08LNT0555900.1	osa-miR821b	Cleavage	1.0	14.687	1	24
Osa08LNT0555900.1	osa-miR821b	Translation	4.5	6.647	1	24
Osa08LNT0555900.1	osa-miR821c	Cleavage	1.0	14.687	1	24
Osa08LNT0555900.1	osa-miR821c	Translation	4.5	6.647	1	24
Osa08LNT0555900.1	osa-miR1881	Cleavage	4.5	21.244	1	24
Osa08LNT0555900.1	osa-miR5162	Cleavage	5.0	6.647	1	24

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa08LNT0555900.1	8	nan	Resistance or Tolerance	Drought tolerance	RG978	RZ66
Osa08LNT0555900.1	8	Aroma	Physiological trait	Eating quality	RG28	RG1
Osa08LNT0555900.1	8	dth8	Physiological trait	Flowering	RG333	RZ66
Osa08LNT0555900.1	8	nan	Physiological trait	Source activity	R727	R202
Osa08LNT0555900.1	8	QalRr8.1	Resistance or Tolerance	Other stress resistance	RG28	RM223
Osa08LNT0555900.1	8	QalSr8.1	Resistance or Tolerance	Other stress resistance	RG28	RM223
Osa08LNT0555900.1	8	qMRLw8	Resistance or Tolerance	Other soil stress tolerance	RM223	R727

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore
Osa08LNT0555900.1	osa-MIR821a	96.0	275	1	274	1.48e-125	446
Osa08LNT0555900.1	osa-MIR821b	94.182	275	7	281	9.43e-118	420
Osa08LNT0555900.1	osa-MIR821c	94.757	267	1	266	4.04e-116	414

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus