>Osa01LNT0461300.1

TCAGTATTGACATGTAGAATGGGACTCTCTCTTTATCCTCGTCCGATTAATCCGCTTTTAAAAAGATTTCGAAAACTATGAATTGAAGGATTTGATTACTCAATATTCGATTGGAATGGATTCACAACAATTCTAAAAAAATTATGAATTTTCTATTTCATAATCATTCCTATTTTCATTTTAAAAAAGAATTAAAGAACCTATATTATGATATGAGTTCTGTGATTAATCGTTTGCTATGCCAGTATCTATACGTGTGTATTAGATTTCGAAAGCCCTTCTTTCCCTAATTTAGAAGGGAGTTCCGCTAGCAACACAACGTAATTAACTCGATTCGTTAGAACAGCTTCCATTGAGTCTCTGCACCTATCCTTTTCCTTTGGGTTCTAGTTCGAGAACCGCTTGTTTTCTCAAAACATGGATTTGGCTCAGGATTGCCCCTTTTTTAATTCCAGGGTTTCTCTGAATTTGGAAGTTGCCACTTAGCAGGTTTCCATACCAAGGCTCAATACAATCAAGTCCGTAG

Explanation	CPC Score
noncoding	-1.19217

Transcript ID	Chromosome	Locus	Ref	Alt

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa01LNT0461300.1	osa-miR417	Cleavage	5.0	14.789	1	21
Osa01LNT0461300.1	osa-miR5492	Cleavage	5.0	10.264	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa01LNT0461300.1	1	qCC-1	Physiological trait	Source activity	RG541	RG101
Osa01LNT0461300.1	1	brt1d	Resistance or Tolerance	Drought tolerance	C742	C904
Osa01LNT0461300.1	1	rfw1b	Resistance or Tolerance	Drought tolerance	C813	C955
Osa01LNT0461300.1	1	qLRC-1	Resistance or Tolerance	Drought tolerance	RM237	RM302
Osa01LNT0461300.1	1	gpy1	Others	Others	RG541	RG101
Osa01LNT0461300.1	1	nan	Morphological trait	Root	RM212	R2417
Osa01LNT0461300.1	1	nan	Physiological trait	Source activity	RG532	RM472
Osa01LNT0461300.1	1	An10	Morphological trait	Panicle/flower	nan	nan

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus