>Osa12LNT0135100.1

ATCAATCACTGAAGATTCATATTTCCAGGTTTCAAGATGACCTGCCCAAGTAGCATATTGCAAGCTTGGGTGAAACACCTCAAGAGTCAAGAGCCACAGTAGATGAAACCAAAGAAAACAACCACCTTAATAACTCAATGACCCATCAAAGGATTAGTTGATCCTTGTGCCAAAAAAAAAACAAAGTAATTCAGCAACCACAAGATCACATCACTGTTTACTATTATTCATACAGCACACTGATTGTCTAGTTCCAAATTTCTTAACTTGAAAATTTGCGTCCTGTCATCTTCTCAGATTCATACAAAATGTGATTGATAAGGCCCCTTGCCGCATCATCCTTCATTTTCTGTATCTTCTCTGGATCAGTTTCATGCATGTTTTTCTTAAACTGCTCCCTTACCATTGAAACAATAAGCCCCGTATTGTGTTTCTGATGCCCAATGAACCTGGCCCTCCTTAAGCATTCACGGTACAGTCTGATCACATTATCAGCAAGCTCTGGAGGCAAAGCCTTTTGAATCGAAGGCATCTCCTTCCACCCACTCTTCAGTCTCTGAACCAGTCACTGTGACTGCCACGGCGGTCGCCGTGGGGAGGGGGAGATTGCCGGTGGCGGTGGCGGCGGCGCACGGGCGGGAGGGGACGAGAGCGGCGGCGGCGGCGTCGTCAAGCTGCGG

Explanation	CPC Score
noncoding	-1.21354

Transcript ID	Chromosome	Locus	Ref	Alt
Osa12LNT0135100.1	12	23256197	G	A
Osa12LNT0135100.1	12	23256658	T	C
Osa12LNT0135100.1	12	23256726	T	G
Osa12LNT0135100.1	12	23257293	A	G
Osa12LNT0135100.1	12	23258268	T	C
Osa12LNT0135100.1	12	23258481	A	G
Osa12LNT0135100.1	12	23258485	T	A
Osa12LNT0135100.1	12	23256413	T	C
Osa12LNT0135100.1	12	23256388	T	C

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa12LNT0135100.1	osa-miR408-5p	Translation	5.0	16.765	1	21
Osa12LNT0135100.1	osa-miR1856	Cleavage	4.5	15.535	1	21
Osa12LNT0135100.1	osa-miR1869	Cleavage	4.5	13.844	1	24
Osa12LNT0135100.1	osa-miR5487	Cleavage	4.5	15.495	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa12LNT0135100.1	12	qDLA-12-3	Resistance or Tolerance	Blast resistance	RG463	RZ816
Osa12LNT0135100.1	12	nan	Morphological trait	Seed	RG543	RG81
Osa12LNT0135100.1	12	Bph18(t)	Resistance or Tolerance	Insect resistance	RM463	S15552

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus