© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0135400.1
CAGAACAAAAGAGCAGCTATTATAAACATATATATTTGACTGATGTTACATTTGGTAGAAACAACCACGGAACAGAAACAACTGGAGGAAAACAGATTTTGCTACAAGGCCGTCACTCTAATTTTGAATGCAATCACTTCAATTCAGCAAAAATCGCTGAAACAAATGGAGTCAGGGTGGTGTTGTGTTGCACATCAACTGACAGATACCTCATTTCCTTTTGGTTTCGTATCGCTCGTGCATACAGTATGTGCTGCTTTGGTTGTTGGTAACACTGATCAAGATATGTGGTGAAATTGGCCCCACTTTGGAATTGGTTTCTGTTGGACAAAAGGATTTCGGATTTCCTCACGATCTGACGGTCGATGGCTTCTCCACAACAAGTGTAAGTAACAAGAATGCGCCGAAAGAGATGATGAGCGCAGTGGCCATCAAGATAAGCATGGCTTGTAGCGTAATATTTGGGCTCAGGAAGAAGATGACTGCGATGGCACCCGATTGCCAAACCTTCAACTGTGCAAAAGCTGCCTCCTTGACATCCTCGAACAGCAGCCCAAGTAATGCACTTAACTGTGTATTCAAGACACCATCACCAACACCCCATAAGGCACCTATAAACAGTGGAACTGCTGCACCAAGCAGTCCACCCATTGGACTGTAAAAAAGAAGTAACCAGAACAGGACTACAGCCTGAAGAATAGCTCCAACCGAAACGATAGATGTAGCTGAATGAAGCCCAGAGGTCAAACGTCCAGCAACCAATGAACAAACAACATCGGCTGCACCATATATTGCCATGGCTCCGCCAACGCCAGAGATGCCAAGCACAGGTGTTACAATATTTTTCGTGAAAACAGCCCATACAAATGCCTGTTGTAATCCTGAATATGCAATAAGAGGGATGATAAGAATCATCCTTCGGTCCTTGAGAGGGGCAACAATATACTTCATCATAGCCCCAAATGAGGAATGTGTTGGAGCATTATTTCCTTTCTCGTCCCTTTTGGAAAGTAAACACATTAATATAATGCCGACAATCATGCAGCCAAGAAACACAACAAACAGCAGACTTTTCCCCGTGACACTTCCTCCATCCTTTCCATCTCTCAGTAGTGCAAGAGAGATCAAATTTCCAATGACCTGTGTGCTAGCAAACATTCCCCAGAACTCTCCATTGAAGTTCCCCAAAGTTTGGCCTTCAGGCAAATTATTGTCTCTTGCATGACTGAGGGCAGCAGACGTGAGATATGTACCCTGCCCAACCCAGATGATCGATGCAGTAAAACCCAGATACAGGGAGGCTGGCACCATTGTGTACCATGTCGGGACGAGGTTGGCGAGGATGAAGATGACGTAGCCGCTGGTGCCGACGACGAGCGCGCGCTTGGAGCCGAGCCACGTGACCACGGGCGACGCGGCCACCGAGAAGAGCGTGAAGGAGGTGTACAGAATCCCCATGGACACCGTGCCCAGGTCGCCCTCGGTGTTGACCGAGCTCTCGAGGTTCTGCGCGGCGCAGTAGGCGGAGAAGACGAAGAGGAACGCGGCGGAGAGGACGTGCAGGTCGCCGGCGTGGCTACGGCGGTGGCCCGAGTAACCCAACGGCGCGGCGCCGGCGAGGAGCGGCGCCGCGGCCGCCTCCTCCTCCTCGTCGCGGTGGTGGCCTCCTCGCGCGTCCATGGCCCGCGGCGGAGGCGGAAGCTTCTAGAAGCGATCGATCCGCGCGGCTT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0135400.1 | 12 | 23310418 | T | C |
| Osa12LNT0135400.1 | 12 | 23309131 | G | A |
| Osa12LNT0135400.1 | 12 | 23309100 | A | C |
| Osa12LNT0135400.1 | 12 | 23308098 | C | T |
| Osa12LNT0135400.1 | 12 | 23308572 | G | A |
| Osa12LNT0135400.1 | 12 | 23308861 | T | C |
| Osa12LNT0135400.1 | 12 | 23309294 | T | A |
| Osa12LNT0135400.1 | 12 | 23309727 | C | T |
| Osa12LNT0135400.1 | 12 | 23310650 | A | G |
| Osa12LNT0135400.1 | 12 | 23311038 | T | C |
| Osa12LNT0135400.1 | 12 | 23311058 | T | C |
| Osa12LNT0135400.1 | 12 | 23311206 | A | G |
| Osa12LNT0135400.1 | 12 | 23311302 | T | C |
| Osa12LNT0135400.1 | 12 | 23311775 | A | G |
| Osa12LNT0135400.1 | 12 | 23310394 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0135400.1 | osa-miR5828 | Cleavage | 5.0 | 18.753 | 1 | 21 |
| Osa12LNT0135400.1 | osa-miR160a-5p | Cleavage | 5.0 | 15.208 | 1 | 21 |
| Osa12LNT0135400.1 | osa-miR160b-5p | Cleavage | 5.0 | 15.208 | 1 | 21 |
| Osa12LNT0135400.1 | osa-miR160c-5p | Cleavage | 5.0 | 15.208 | 1 | 21 |
| Osa12LNT0135400.1 | osa-miR160d-5p | Cleavage | 5.0 | 15.208 | 1 | 21 |
| Osa12LNT0135400.1 | osa-miR394 | Cleavage | 4.0 | 18.038 | 1 | 20 |
| Osa12LNT0135400.1 | osa-miR160e-5p | Cleavage | 5.0 | 15.208 | 1 | 21 |
| Osa12LNT0135400.1 | osa-miR171b | Cleavage | 5.0 | 17.824 | 1 | 21 |
| Osa12LNT0135400.1 | osa-miR171c-3p | Cleavage | 5.0 | 17.824 | 1 | 21 |
| Osa12LNT0135400.1 | osa-miR171d-3p | Cleavage | 5.0 | 17.824 | 1 | 21 |
| Osa12LNT0135400.1 | osa-miR171e-3p | Cleavage | 5.0 | 17.824 | 1 | 21 |
| Osa12LNT0135400.1 | osa-miR171f-3p | Cleavage | 5.0 | 17.824 | 1 | 21 |
| Osa12LNT0135400.1 | osa-miR414 | Translation | 3.5 | 20.024 | 1 | 21 |
| Osa12LNT0135400.1 | osa-miR1861c | Cleavage | 3.5 | 12.38 | 1 | 22 |
| Osa12LNT0135400.1 | osa-miR1861d | Translation | 4.5 | 12.38 | 1 | 22 |
| Osa12LNT0135400.1 | osa-miR1861e | Cleavage | 2.5 | 12.38 | 1 | 22 |
| Osa12LNT0135400.1 | osa-miR1861g | Cleavage | 4.0 | 12.38 | 1 | 22 |
| Osa12LNT0135400.1 | osa-miR1861h | Translation | 4.0 | 12.38 | 1 | 22 |
| Osa12LNT0135400.1 | osa-miR1861j | Translation | 4.0 | 12.38 | 1 | 22 |
| Osa12LNT0135400.1 | osa-miR1861k | Cleavage | 2.5 | 12.38 | 1 | 22 |
| Osa12LNT0135400.1 | osa-miR1861m | Cleavage | 2.5 | 12.38 | 1 | 22 |
| Osa12LNT0135400.1 | osa-miR1861n | Cleavage | 4.5 | 12.38 | 1 | 22 |
| Osa12LNT0135400.1 | osa-miR166h-5p | Translation | 4.0 | 10.091 | 1 | 21 |
| Osa12LNT0135400.1 | osa-miR5144-5p | Cleavage | 4.0 | 10.956 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0135400.1 | 12 | qDLA-12-3 | Resistance or Tolerance | Blast resistance | RG463 | RZ816 |
| Osa12LNT0135400.1 | 12 | nan | Morphological trait | Seed | RG543 | RG81 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)