>Osa12LNT0135600.3

TGTGGAAATAGGCGGTTACCCAGTTCAAGGCTCACTAGTGGTAGTACACAACACCAATGTCACATTGTTTCAAGTTAATGTTCAGCAAAAAGCAAATGACCACCAAACAAAGCAGCTCTCAAAAGACTACAACATCCTGGACTCCCAACATATGAGCACACAAACAGGCGATGTGCCATACCAAACTCATGGCAAGCACACTTAGCAATAATACAACACGCCGCTTAGGGCTTCGGTTTAATTGAAACAGCTTGGTTGGACCAGGAAGGAAGATGGAGACTGACTAGAATTGGAGGTGCTGTGGAGATCATGCAGCTATCCCATTTCGTTGGTTCAAAGTTCTGTCAGTCGCTGCGGGCAGGGGAAACATCGGCGGACCTAGAGCGGGATCCTGGAGGCGACCCTGAGGAGTGCCTAGGAGACCTCCGGTGTGGAGGGGATCCATCGCTGTCAGGTGGGGGCGACCTCTTCTCATAACCGTTATCAGCATCGCGAGGGTCGCCATCTCTACTGGCAGGAGAGTAGGATCTCCGCTTCTTCTCTTCATCATGTTCTTTTGGCTGACGCCTAGGAGATTTTGTGGGGTGCGTATCCTTTCTCGGTGGGGAAGCTGAGTAGTCATCTCGCCGTCTTGGAGCAGGAGAGTATGACCTTGACCGTGGACGACCTCGATAGTGGGGAGAGCGAGAACGGGAACGAGACCTCCCATAATATGAAGAGCGGCGCCCTTCGTTTCCAGAGTAACCCCTGACTCTAGCTCTACTGCGCATTTCCTCTGGCCTTTTCCGCGACTCAGCAGCAAGAACAACAGTTATCTCCCGGCCGAAAAACACCTGGCGATTCATGTGATATTGAGCCTCAGAGGCATCATAAGGGTCAACGAACTCCACAAATGCAAATCCCCGTGGTTCCCTGTAAATGTTGATTATATTAGAAAAGGTAGTTTAAAGCAGATTGATGAAAAAACCTAACCATAACGAGGGTGTAAAGTGCTCATGTATAGCATTGTGTCTGTCATGTTACCATTACAGTTCAAAACTCAATATGTCCTCTATGATTCTCGATGCAAAAGCAGTTAGATGTCCAGGCTCTAGTATCTGAATTTCTTGTGTAACACTACGCATGGTGATCCTCATAAAGAGTATCTTCACAAAATCATTCGCTTCAAGTTTCCAAATGTTTGAGAAGTCATGATAGTACTTCAAATAAACTTCACTTCATATTTATCTTCTCATGGACCACCCAGTACAACTCTCTTATCTTCTCTTCGTGAAACTAATTTTCTCAATGAAACAAATCTTGTCTTCATAGAAGAACTTCGTACGGAAAAGACTTTATCTTGCCAAACAAATGAATTGTTAGGAATATTAAAAGGTATCCTTCAACATTGTATTTACTTCAATCCAACATGACCCCGCTGTAATAATCCTTTGGCAGGTAAACATCCCGAACAGGACCAAACCTTTCAAAAGGAACTCGAAGATCCTCCCCTCTGCAGCTTAATGGGATGTTGCGGACCAAGAGACTTCCAGAACCCTGCTCCCTCCGTCCTCCATATCCCCTCCTAGGGGGACTTCTTCCTCTGCCACCATAGCCCCTCCTAGGGGGACTGCGATATGGTGGGCTGTACCTCCTCATTGTTTTGTCGCGTAGAGCTCCCGGAGAAGCCGTGCGCCGCCGCCGCCGCCGCCGCCGGAGGGGACGAAATCGGTGGGGGGATGCGG

Explanation	CPC Score
noncoding	-1.20757

Transcript ID	Chromosome	Locus	Ref	Alt
Osa12LNT0135600.3	12	23591464	C	T
Osa12LNT0135600.3	12	23590862	A	G
Osa12LNT0135600.3	12	23590878	G	A
Osa12LNT0135600.3	12	23591871	A	T
Osa12LNT0135600.3	12	23591922	T	C
Osa12LNT0135600.3	12	23592470	A	C
Osa12LNT0135600.3	12	23592958	T	C

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa12LNT0135600.3	osa-miR5825	Translation	5.0	10.966	1	24
Osa12LNT0135600.3	osa-miR6252	Cleavage	5.0	10.054	1	23
Osa12LNT0135600.3	osa-miR399a	Translation	4.5	17.43	1	21
Osa12LNT0135600.3	osa-miR399b	Translation	4.5	17.43	1	21
Osa12LNT0135600.3	osa-miR399c	Translation	4.5	17.43	1	21
Osa12LNT0135600.3	osa-miR169f.2	Cleavage	3.5	13.597	1	21
Osa12LNT0135600.3	osa-miR2118i	Cleavage	4.5	19.879	1	22
Osa12LNT0135600.3	osa-miR2867-3p	Translation	4.0	22.519	1	20

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa12LNT0135600.3	12	qDLA-12-3	Resistance or Tolerance	Blast resistance	RG463	RZ816
Osa12LNT0135600.3	12	nan	Morphological trait	Seed	RG543	RG81

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus