© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0135900.1
GTCAAATTTATCATGGCCCATTAAACATGACAGCCTCGATCAAATTATCAGCCCATTAGAAGTAACGGGCCATTCAACGTGTGACTGAGCTAACTTAACTGATTTCAGCCCAGTTTAACGTCGTCAGGTGTAAACATTGAGGACACATCATATGGCAAGCAAATGGGAAATAAACGATTCTCAAACTACAAAATCTCAATCAGTACTCGCTTCAGCATCGACCATCTCAATCTGACTTCTACACATTTCATCAGGAAACTGCCTTGAGGGAGGAACTCGCTAAGTAAAATGTCGATCCATCCTAGTCAGCATAGTCAGGTTTTGTACATCAGTCGTTCTTTCTACTACGAGTAGGCACGGGAAAGAGGATTGATTACCAAAAGGGGAGCAGGAGCGTCATTCTTTGGATGAAGACTGGCCATGGCTTTGAGGGGGCTAAGAAGCACGACCTTCCAAAATCAGCTCCTTTTGAATCAACCATAGAGGGAAACAGCATGGTGGTCATAGTTACAACAAATCCAGCTTACAGTTGTCTGGTTGGGTGCAGGTTGGGTGTTCTTTGGAACAGGATCGCGTCATACCACCCTTGAGATAACGCGCATTGAAGATCCAGAAAAAGAAAACATGTACAATGTTGATAGCTCTGCTTATCCCAAGATCAACATTATGCAGCATTAAAGCTGCGGAAGCTCCTGTGGGTTCTCCATTGATGCCCTTAGTATCATGCCCGCCCTCCGCTTCCGCTCATCCTTTACTTCCTCCTTCAAGAAAGACGGATCCTCCCTCAGATCCAGGGGTTTTGAATTCAACACAGCTGATAACGGCTTCTTATCAATTCCAATCTTGAGGTGCACCGGTGCCCTCTCTTTGGGAACAATGCTCTTCTGATTCTGATTGTTGTCCCAACCTGGCCCAGTATCAATGTCCATCATGTTTGCAGCCTGAATCGCTGGTGCAAATGCGTCGAGGACAGAGATTTTCCTCCTCTGTGGTTGCATAGCAACATCAGACACCTCCTTCTCCCCAGGTGGCAATGCAGGCTCAAGGAATGGATTTCTCTTGCTCCCAGCCACCTGTATCTCCTTCCCCTTTTCCGCAGTATTCTCTGTAACCGCTGGCCTAAATCCATCAGCACCTGCAAGTGCCAACCGCCGCTGCAAGCTGAGCAGTGACTTCTCAGCCTTCCTCCGCTGCCGCACCTGCTCAACCTTGTCCACCCTGGCCTTGGCCTCCTCTTCGCTCCAAACCTCTGTCCTTATGTACGTGTGTGGATCCGGGAACACCGGGAGCCATTCCGGCACATGCTTCATCCCAGACTCCTTCCCGGCCATCGCGAAGCTTTGAGCTGGCTGCGGCTCCACGCGCGGCACCGGGAAGCTAGGCAGAGGCCGCACGAACGGCACCTCGGGCTTGGACTCAACGTAATCAATCAGCTCCCTGACGACGCCCGAGCCGACAAGGCAGCGGTCGGAGGTGGCCGCGCCGACGAACCCATCGAAATCGGTGCCGATCTCCTCGAGCGCCTGTATGATGTCGTACTCGTTGGCGAGGACGCGGCCGGCGAGGTTGGCGTTGAACGCCGCGGTCCTGCCGAGGTGCACGACGTAGCGGAGGATGACGTCGACGAGCGCGTCCACCGCCGAGCGGTGCGCGCAGTCGAACCCGGCCGCCTCCAGCGCCTGCGCCACGGCCGCCCGCGCCACCGCCCTACCGTACTCGTCCCGGCTCCCACTCCCGCTCCCGCTCCCGCCTCCTCCCCCTCCGCCCCCGCTCATGCTTCCGCCGCCTCCTCTCCTCCTCCACCCCCAACCCGACCGCTCATTCCGTCGAACACCTCGCGGGCGTGGCGGGGTTCCTCCTCCCAGATCCGGAGCTAGGGCTCGGCCTAGGTCTCGACGCCGCCGGGGACGCCACCATCCGCGCCAAGCCGGCTGAGCTGGAGGCCTCGAGGCAGCAGCAGCAGCAGTAGCCGCGGGGGTCGAATCGAGCGGGCGCCTCGAGCTGGGATTCGAATTCGAACCCGGATTGAGCGCGCGGCGGTGGGGATCGGGCGGGAAACCGCGGGTGGGGGGAGGAGGTGGGGGTTTAGGGTTTCGGGGGGGAAGCGGAGAGGGGAGGAGGAGGAGACCGTTGGGTGGATTGGATTAGGGCTTGGAGGAGGGTTTGGATTCGGATCCGAGCACGCGAAGCGAAGTGGGGGGAAGGTCGAGGTGGAGACGAAGGGGAGAGAGAGAGAGGATGGCTTTATAGAGGAGGAGGCGGTGGGTGGTGCGCGGAGCTGGAAGACGAAGACAAGTGGCGCTCGGTGATTGGATTAGCCTGGTGGCACGGTTTTATGGGCCAACTTGTAGCACGGCCCAATTAGGCCCAAATCGTCGAATGAAAAGAATACACAATGCACTACTAATAACCAGATCTCCCTGATACAGGTTTGAGAACTTGCAATGGATGGCAGAGTATATGAGGAACAAAATTTGACAGAATATAGGTAGTAGTAGAACATTGCATGCTCCATCCCCATCACGGCATGATCACAACCACATCTGGTGAACTTCTGGGGAACCCAACTTTGCAACCTCTGACGGTATCCAGCATCGCGGTGGGAAGCAATCTCGGGCAGCATGGCGAAATGGCGAGTCGCAGTCAGACTTCGCTTTAGTGGAGCAGAAGAGCAAGGGAGTTTGTGGCCTCTACTGATCATCTCAGCTCGCTGTGCAGCCATGGGAGAGATCCTCTCAGCGTGCACGCTGGTGAATCTCCACGCTGCCAGCGGAAGCCTGGTTCGCGGCTCGGTTGCTCCCGAAGTTCTTGCGGTTTGATTCTCTCGCTATTCTTGAACCAAACTGGATTGCCCGCTTTGGTTGAAGTGCAGCCTCTTTTAAGCCCAGTAGGTTTGCAACCTCTCTCAAGATCTTCTTGTCGCCCTTTCCAACAGGTTCATCAAGTTTAGCAATATCCCACAATGGAATTTCCAACAAAGTTTTGATCACATTCTCATCAAGAAATGGAAAACGTGCCTCCTTGCCATGGTCAGAAATGCACCTATCGTCTCTTCCCATATTTCTTTTCCAGATTCTCTGTACATCTAGTCTCATCTCCTCATCAAGTAAAACCCAGCCTCCAAGTCTATATTTAGTCCTATGTCTTCCATAACCAGCGCACTGCTCATCAGCCCCAGAACCGACTAAAAGAACTCTAGAAGTTGACTTGTACTTGTAGCGACAACCATCTTGCATGTTGCATATACTTCCATCCACCCAACCATCCCCACCAGCAGCCAACCAGAGAGCTATACCAATATTTAAATCCATATAAGTATTTGAAGGGTATATAAGTGACATCACATGTTCACTTTCTCCTTTCAAGTTTGTCAAAACTGTGTCAATCTCAACAAGACGCCATCTACGGATAGGGGAAATTCTCTGAAGTTCCTTCAGTCCTGCCAGTGCAGAAATCCTATCTGGAGCAAGTTGCCCATCAAAACTGACATTCAACAAATCAATTGTCCATTTGGAATCAAGGCACTGGTCTAATAATGCTGCAAGTATCATGGAGTCCAAGCCACCAGAGAAAAGGATTGCTATTGGGGCTAGCTCATCATCCTTTAGTTTATTTAGATCATCCTGAAAGAGTCTGTTCAAATTGGTTCGCAGCATTACAGATTCCCGCAACGCAATCAACACCTTATACGCAGCATTTTTGTCAGCTTCGGTTGAGTTTCTGAAGCTCTGAGACAAACAATAGTCCCCTACAGAATTCTGATGTGAAGTTAAGTCATCCACAGTAGGAACTATCGATTTCCTCTTCCATTGGATTAATTCATCCAATGAAGAGTTGATCCAGTCATGCCTCCTAACTTCGGAGACACATGCTTCCTTCATACACATGCCACTTTTTTCAAGGCTTTTCAATTGGATGCTGTATATCCCACAAGGAAGCTCTTCCCAGTAACTCATGTTGGTGGACTCAGGAAAATCATTATCTTCCCCTGACTCCATAACTTTGACAGTTGGCGCAGAGTTATTACTTGCAAATGAAGGGGGTGATACTGATGATAATATAAAGCGTGGATCATCAGGTGATGGCCAATGTACCAAGAGGCTTCTTCTCCCGAATGCATCCCGGCCAAACCACATTGTTTTTGAGTCCTTCTGCCAGTATATCAAAGCCCAGGGGCCTTTGATTGTGGAAAGGATCTGTGGAACTGATTTCCCAACACTTCCACAACAGAGACATGCTTCATCTCTAACAAGAGCATGGCACTCACAGGAACAACAAGATTCCAGTGATGACAGAAGTGATTGAGTATCATTTTGGTCATCAGCAACATGGACTCCTCCATAGATCTCACCGTTATATACTAAAACATTTCCTGATTGACCCACCATCGGCTGCAAAATCGGCTCAGCTCCCCTGAGCTGCAGCGTTGCTCCGATGAAGCACAACTCAGTGTCACCCACATCACCCCCATTCCCAACTCCACAATCACACCCATCACTCCCTAAGGTCGTGCCATCCGCGCGGACGCGGAGCCTCTCGCAGCCGAGGCTATCCGGGCCACGCCGCCGCAGGGCTGCCTTGAGCTCATCCACCGTCACGCCCTTCCCCTCGTCGCTTGGTTGGATTCCGACGGCAGCAACGGCGGCGGCGGCGGCGGCGGAGGGAGCGACGACTACGCGGCCGCCGCCGGAGAGGACGAGGGCTATGCCGCACATCGCTGGCTCCTGGACCCCACTTGTCAGTTGCTCGAGCCAAGCCGTAGCCGCGTGAAGTCAAGTGCAA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0135900.1 | 12 | 23726735 | A | C |
| Osa12LNT0135900.1 | 12 | 23726751 | A | C |
| Osa12LNT0135900.1 | 12 | 23727022 | T | C |
| Osa12LNT0135900.1 | 12 | 23727111 | G | C |
| Osa12LNT0135900.1 | 12 | 23727178 | T | A |
| Osa12LNT0135900.1 | 12 | 23727683 | T | A |
| Osa12LNT0135900.1 | 12 | 23727912 | T | C |
| Osa12LNT0135900.1 | 12 | 23729195 | T | C |
| Osa12LNT0135900.1 | 12 | 23729665 | T | G |
| Osa12LNT0135900.1 | 12 | 23729760 | C | G |
| Osa12LNT0135900.1 | 12 | 23729837 | A | G |
| Osa12LNT0135900.1 | 12 | 23729984 | T | C |
| Osa12LNT0135900.1 | 12 | 23730749 | C | T |
| Osa12LNT0135900.1 | 12 | 23730761 | A | G |
| Osa12LNT0135900.1 | 12 | 23730946 | T | C |
| Osa12LNT0135900.1 | 12 | 23731338 | T | C |
| Osa12LNT0135900.1 | 12 | 23731414 | A | G |
| Osa12LNT0135900.1 | 12 | 23731881 | A | G |
| Osa12LNT0135900.1 | 12 | 23732049 | T | A |
| Osa12LNT0135900.1 | 12 | 23733579 | T | C |
| Osa12LNT0135900.1 | 12 | 23734124 | T | C |
| Osa12LNT0135900.1 | 12 | 23734268 | A | G |
| Osa12LNT0135900.1 | 12 | 23734351 | G | T |
| Osa12LNT0135900.1 | 12 | 23733265 | T | C |
| Osa12LNT0135900.1 | 12 | 23731820 | A | G |
| Osa12LNT0135900.1 | 12 | 23733047 | G | T |
| Osa12LNT0135900.1 | 12 | 23726342 | A | C |
| Osa12LNT0135900.1 | 12 | 23730745 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0135900.1 | osa-miR5525 | Cleavage | 5.0 | 17.831 | 1 | 22 |
| Osa12LNT0135900.1 | osa-miR5819 | Cleavage | 4.5 | 13.192 | 1 | 21 |
| Osa12LNT0135900.1 | osa-miR5827 | Cleavage | 4.0 | 16.503 | 1 | 21 |
| Osa12LNT0135900.1 | osa-miR2873c | Cleavage | 4.5 | 22.045 | 1 | 21 |
| Osa12LNT0135900.1 | osa-miR156a | Cleavage | 4.0 | 17.005 | 1 | 20 |
| Osa12LNT0135900.1 | osa-miR156b-5p | Cleavage | 4.0 | 17.005 | 1 | 20 |
| Osa12LNT0135900.1 | osa-miR156c-5p | Cleavage | 4.0 | 17.005 | 1 | 20 |
| Osa12LNT0135900.1 | osa-miR156d | Cleavage | 4.0 | 17.005 | 1 | 20 |
| Osa12LNT0135900.1 | osa-miR156e | Cleavage | 4.0 | 17.005 | 1 | 20 |
| Osa12LNT0135900.1 | osa-miR156f-5p | Cleavage | 4.0 | 17.005 | 1 | 20 |
| Osa12LNT0135900.1 | osa-miR156g-5p | Cleavage | 4.0 | 17.005 | 1 | 20 |
| Osa12LNT0135900.1 | osa-miR156h-5p | Cleavage | 4.0 | 17.005 | 1 | 20 |
| Osa12LNT0135900.1 | osa-miR156i | Cleavage | 4.0 | 17.005 | 1 | 20 |
| Osa12LNT0135900.1 | osa-miR156j-5p | Cleavage | 4.0 | 17.005 | 1 | 20 |
| Osa12LNT0135900.1 | osa-miR166b-5p | Translation | 4.5 | 17.998 | 1 | 21 |
| Osa12LNT0135900.1 | osa-miR156l-5p | Cleavage | 5.0 | 17.005 | 1 | 21 |
| Osa12LNT0135900.1 | osa-miR166i-5p | Cleavage | 3.5 | 20.956 | 1 | 21 |
| Osa12LNT0135900.1 | osa-miR171i-5p | Translation | 4.5 | 20.579 | 1 | 21 |
| Osa12LNT0135900.1 | osa-miR426 | Translation | 3.5 | 22.289 | 1 | 21 |
| Osa12LNT0135900.1 | osa-miR396e-5p | Cleavage | 5.0 | 19.756 | 1 | 21 |
| Osa12LNT0135900.1 | osa-miR395v | Translation | 4.0 | 22.135 | 1 | 21 |
| Osa12LNT0135900.1 | osa-miR810a | Translation | 5.0 | 18.557 | 1 | 21 |
| Osa12LNT0135900.1 | osa-miR1846a-5p | Cleavage | 5.0 | 9.067 | 1 | 21 |
| Osa12LNT0135900.1 | osa-miR1846b-5p | Cleavage | 5.0 | 9.067 | 1 | 21 |
| Osa12LNT0135900.1 | osa-miR1861b | Cleavage | 5.0 | 6.661 | 1 | 22 |
| Osa12LNT0135900.1 | osa-miR1861c | Translation | 5.0 | 6.661 | 1 | 22 |
| Osa12LNT0135900.1 | osa-miR1861f | Cleavage | 5.0 | 6.661 | 1 | 22 |
| Osa12LNT0135900.1 | osa-miR1861i | Cleavage | 5.0 | 6.661 | 1 | 22 |
| Osa12LNT0135900.1 | osa-miR1861l | Cleavage | 5.0 | 6.661 | 1 | 22 |
| Osa12LNT0135900.1 | osa-miR1846c-5p | Cleavage | 5.0 | 9.067 | 1 | 21 |
| Osa12LNT0135900.1 | osa-miR1846e | Cleavage | 5.0 | 14.454 | 1 | 20 |
| Osa12LNT0135900.1 | osa-miR2091-5p | Cleavage | 4.5 | 24.982 | 1 | 21 |
| Osa12LNT0135900.1 | osa-miR2931 | Cleavage | 4.0 | 23.944 | 1 | 20 |
| Osa12LNT0135900.1 | osa-miR5161 | Translation | 2.5 | 15.739 | 1 | 20 |
| Osa12LNT0135900.1 | osa-miR5161 | Cleavage | 5.0 | 22.87 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0135900.1 | 12 | qDLA-12-3 | Resistance or Tolerance | Blast resistance | RG463 | RZ816 |
| Osa12LNT0135900.1 | 12 | nan | Morphological trait | Seed | RG543 | RG81 |
| Osa12LNT0135900.1 | 12 | spl11 | Others | Others | nan | nan |
| Osa12LNT0135900.1 | 12 | qSD12 | Physiological trait | Germination/dormancy | RM3331 | RM235 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)