© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0136100.1
TGGAATAATAATAAACTGGTGTAGTGGTATCACTGCTTTAGCAAGCGTGCCAGAATGCCAGGCAACTGGGTTGCAGTGGGTATCACATTTCTCAGCTCTAAAGCCACTGCTTTCCAGTTATGTCCAGGTAGTGCTCTAAGCACCTATGCTCTCATCTCACGAGCTCTACAAAAAATTTACAAACTATACACAAGCACAATCAAAGTGGGGAAAAACAATCATGCTTGTATGTACAAATGATCATGTCCAGTTTGGCAGGGGCTCAGAAAGAAGCCTCCAATCAACGTGGAAGTATGCCCTACAAAAGCCTAGAAGCTATTTCGTGGAGGAGGGTCCTCTTCTGCGACGCTGTGATGATGCCGTTATTCTCGGCGTTTTCCAGAACGTCGGCCATTATGGAGGCCGCATGGCCGATAGGTTCTTCGGAGACTCTCTTCAGCATGAAAGCCTGGCAGTGATGTGAAACTACTATGGTGCATGGATCCTGCGACCAAGGCTCTCCATCGACTTGAATGGGCATTTTAGTTTTGATCTCGATCTTTATATGATGACCTTGAGCTAACCTCTGCGCGCGAGAAAGCCCTACCTGCAGCCTTCCAAGATGCAGCATTCCAGTGAAGCTAACTACTTCTAGCATCTTGTCATGCATTGACTGAGGGTGGAAATTGTCAGAAACATCATCCTCGTTCTTCCACAGGTCAACTCCTCCCATGTAGCTCTGAATATTGGCAACAAGGATACCTTCAGAGTCCTGAGGAATATTAATTTTGGATCCATCTATCTCAAGCTTGACATCCCATGGAAAATAATCAAATGTGTTATCCATCATATTCTTTGCTCCCTCTTTTGCATAAAGCACCTTGTTCATAAACTGACTATAAAAACGTTCAGGGTTTTCCTCCCTCAGATTGTGGATATCTAAAGCAACCTTTGCATCACAGCCAACCCCAAAGTAGTTGTTCATATATTTTGGTTGTGACATAAGCTTCCCTTGGTTGTCTTTTATTGTGATCTTCCATCTATCAAGAACAGTAACTGCTGCATGCTCGACATCTTTTAAAACAGAGAACAGACCTCCCTGTTTCTCAACAATTCCGAGACCACCACCCCAAGACAAAACCCTGGCAAGATCATTACCAGTACCAGCTGGAAGGATGGCCACAGGTGGTGGAGCTTCAAACTTCTGTTTCTCAATGGCATCCAGGACCCAAGCAACGGTGCCATCTCCACCACAAACAAGAACTCTGAAGTGGGGTACCTTCCTAAACAAAGTCAAACCAACTTCTGGTCCTTGCTGTTTACCCAGCTCAAAAACCTGGATAGGATTAAGAAGGATCTGCAAACGTTGTCTCAGTGAATCACCACACTGTGCTCCACTTCTCTTGTTAATAAACACTAGCAATGGCCTAGAATCAGAAGGCACATCCACGATTTCATATTTCTGATTATTGTGTACGTGTGAATCCTCATGTTGGCCGTTCGGTATGCTAGTTTTGTTTTCTGTCAACAGCTGTTTATCATTCTCTGATTCAGAGCTTTCATGTACTTCAGGAAGTTCACCATTGGCATGATCCTCTCTCCTTTTAGCTGCATTGTTTGTTTCTTGTGAATCTCCTTCAATATCAGATGGCGGGTCAATAGTACCAGAGCTATCTGAATCAACAGAAATGGTACCCTTTCTGTACTTTTTACCGCGACTCCTGATCCTCTCTCGGACATTGGAAGCCAATTCATTAGCCCCATGTGTTATAGAACTGATAAGTCCTGCTGCACCTGTCCAATGGAGCTCCTTAACACAAAGAGGTGACAATATTAGCCGCTTCAAGGGGCCCAAGTCACAGATATCACCAGTTTCTATAGATAGGTTGTTGTGACAATCAACATGCACTAGCCGTTGGCACCACATACAGTACCAAATTGGAGAACCTGCGAGGAAAGCTCCATTGCAAGATTCATCACAATAGCAGCAGAAAGAATCCTCCTCAGAGCGATCCGATGTGTCAATCCACTGTACAGCCCACTGATGAATGACATGTTCAAAACCAACCATAGAAACACATTTGCAATCTTTGTGCGCATTTCCTGAGCAACTAGGATGTGCAGTGGCACCACAAATATCACACTGATGGATAACTCCCCCCATATACTGCGGAGATGAAACAGACTTCAAGCATACACAGCATTTCAGACCTTTACTACGAGAGCCAAGTTCTTTTCTCCAAATGTGGGAAGAGGCAGGGACCTTATCTTTCAATTTCTTGTACTTCCTTGCCCTAGCTCTGATAGCTTTCATCAAACTCAAGCTGATGTTTTTGTTCAATTGATTGACAGTATAATAAATTGTCACACCAGTAACAGATGCAAAAATGACTGTAGCAATTATAACAGACCAATACTCAGATATGTACACTGAAATGTCATTCCAGCTAGGATACATCATCTTGTACATTCTTTGCACCGGAAGAATCGAATCGCGGGGGCTCAAGAACCGCTCTCTCGCATTGCCGCGCTCGATTCGAGAGCCTTCGCAACGCGCTCCTCTCCTCTCCTCTCTCTCTCTCTCTCTCTCGCCTTCCTTTCCCCTCCTCCGCTTCGATGCTGCGGGAAGAAGGCGAAAGTTGCAGATGCTGTAATTAAATTAATTGATTAATT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0136100.1 | 12 | 23823931 | A | T |
| Osa12LNT0136100.1 | 12 | 23824215 | G | A |
| Osa12LNT0136100.1 | 12 | 23824436 | G | A |
| Osa12LNT0136100.1 | 12 | 23824839 | G | A |
| Osa12LNT0136100.1 | 12 | 23825364 | T | A |
| Osa12LNT0136100.1 | 12 | 23825743 | A | T |
| Osa12LNT0136100.1 | 12 | 23826933 | A | G |
| Osa12LNT0136100.1 | 12 | 23827276 | T | C |
| Osa12LNT0136100.1 | 12 | 23827289 | G | T |
| Osa12LNT0136100.1 | 12 | 23827399 | C | T |
| Osa12LNT0136100.1 | 12 | 23827490 | T | C |
| Osa12LNT0136100.1 | 12 | 23828922 | T | C |
| Osa12LNT0136100.1 | 12 | 23829049 | T | C |
| Osa12LNT0136100.1 | 12 | 23829202 | A | C |
| Osa12LNT0136100.1 | 12 | 23827303 | G | C |
| Osa12LNT0136100.1 | 12 | 23825131 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0136100.1 | osa-miR5535 | Translation | 4.5 | 8.976 | 1 | 22 |
| Osa12LNT0136100.1 | osa-miR5537 | Cleavage | 4.5 | 11.398 | 1 | 22 |
| Osa12LNT0136100.1 | osa-miR5797 | Cleavage | 5.0 | 19.464 | 1 | 21 |
| Osa12LNT0136100.1 | osa-miR2919 | Cleavage | 3.5 | 16.884 | 1 | 19 |
| Osa12LNT0136100.1 | osa-miR2919 | Cleavage | 4.5 | 10.113 | 1 | 19 |
| Osa12LNT0136100.1 | osa-miR5495 | Cleavage | 5.0 | 15.173 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0136100.1 | 12 | qDLA-12-3 | Resistance or Tolerance | Blast resistance | RG463 | RZ816 |
| Osa12LNT0136100.1 | 12 | nan | Morphological trait | Seed | RG543 | RG81 |
| Osa12LNT0136100.1 | 12 | nan | Resistance or Tolerance | Submergency tolerance | R1709 | RM235 |
| Osa12LNT0136100.1 | 12 | qSD12 | Physiological trait | Germination/dormancy | RM3331 | RM235 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)