>Osa12LNT0136600.1

GGACGCCACAGGAGACACCCATCTGCCCATTTTCATTCATCCCATTCTTCTTAGTAGATTAGGAAAATCAGGAGAGGAGATTGAAGTCGCCTGGTGATAGCAAACCGGTGCCGCTGCCACTGCGGAGAAAATTAAACACCGCAGCCGGCGTCCTTCGTCAAGTCGAGTCATTTATCGACAACATGCCGCCATTCAAGATATTTGCGCTGGATGGTGAGCACATTGAATAAATATTAATTTTCTAGATTAAACACAATAGATGTTCGGTCCTTATTGGCGATCGGAACATCTGCGTGTTCTTAATCTATCTTGATCTTGATGATTAAAGCCAGATCAATGAGAGCCGAAACACGTTTATCATCAAACTCCATTTATACAATCAATGGTATAAGGCTGGTCCGGTCCTCATTGGCGATCGGATTATCCGAATACTATTTGATATTTTCTATGCTCAAAATTAGATGTCCGACCCTTATTGGAGATTGGATCATCTATTTGTTACTATGATGCCAATAACAACGGTGCTAGATATGTCCAACTTTCATTGGTGATTGAACAATCTAAGCGGTGTTTTACAAAATATATTTTGCTACCATGCACACGCATGGGAGCTATTCATGATCTTTGGAAGATAAAAATTATGGCCGAGCATTTACGAGGCCGGAGTCACGATATTATTAACATGTCCAAACATATAGGAACGGATACACGTTACTAGGTTCCAACGAGGCAAAAGTAACGATATATCTATATCTAATAAAGGCCGGCATATATGACTGGGCACCGACGAGGCAAAAGTCATCCCCTTTATTATGATACCTGATTCATGTATGGACGTGGTGATAATATATTGTGACCAGGTTTCGGCAAAACAAAGCCACCTATATCACAGTTATCATTAAATTTCTGCACCAACCTCAACCTTCGGCGAGCAATTAATTTTGAAGACGACGATCACAAAGCGCATCTTAATCGGAGGTGTTCCATAGGCTCGTCCTATGGATATAATTAACCGG

Explanation	CPC Score
noncoding	-1.35984

Transcript ID	Chromosome	Locus	Ref	Alt
Osa12LNT0136600.1	12	24539962	G	A

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa12LNT0136600.1	osa-miR1440b	Translation	4.0	23.029	1	21
Osa12LNT0136600.1	osa-miR6253	Cleavage	3.5	15.747	1	22

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa12LNT0136600.1	12	nan	Resistance or Tolerance	Submergency tolerance	R1709	RM235
Osa12LNT0136600.1	12	qSD12	Physiological trait	Germination/dormancy	RM3331	RM235
Osa12LNT0136600.1	12	qDLA-12-3	Resistance or Tolerance	Blast resistance	RG463	RZ816

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus