© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0137400.1
ATCTTCAAAAAAACTCAAGAAATACTTATATTTTGGGATGAAAGAGTACACAAATTCCATATGATTTGTACATAGAGATGGATTCAGACGGAGACAAGGACAACCAAAAAAATCACAGGGGGCAACACAGCCCACAGCACTAATAATTAAGCAAGCAAGGTGGCGTGTGGACGGCGGAATAATTTTGGACGCTGCAAAAAGCCCTCCCCTTTGAACCACAATCATATCCCAACACGCCACAAAAACACAAGTGGCCAAAGAAGATACAATTTTGTACACAAACTACTACAAAGACTCATGTCGACCGTGTAGAGCTTCTCTGGACCACCACCGGTTGCGGACTCGGCGAAAATTATCATCTCACAAACACACAGAAAATGATTGACTTTGCACTATAAAATTCCCAGCTAGGACTCTAGCTAGGAGGCTTAAATCACAAGTGATAAGCTCTGGCTGCTGTGCAGAGGAATTTTGTAATGAGTTGGTTCGCTTGTTTCTGAAGCCAGACCGGATTACCAGGATGTTAGTCTCCTCCAAATGGCAAGGATCTGAAAAGCAGAAGGAAGTGAATAGCGCGGTTAAATGTTGCAAATGTGAGCACAGATTTACCTGGTACAGGAAAGCATTGAGATTGCATAACACAGTTCTGACAAACAATGGTACATTGCCTGGAAATTTTGGATAACTATTTAGAAATACCTGTAGAAAAGAGTAATGGAGTTGTATGTAAAACCATGCTTGATAATAGGATGACTGCTGTACAGCACATCCTATATATTTTGGTCCTATGATCAGTATACACAAGGGTAGTTTAGGTGCAGGTTCATGCGAACTTTGCCAATGAATCATTGTCACTGCTACTATACTGTCCTCAAATTTTCATCGTGATTATCTGGATAGTGTCATAATTATCATCTTGCAAATAAACTTGTGGTGCATACAATTCTATCGAAGATATTCAGCAACAATAGTGAAAATCAACAAATAACTTATGGGGCGAATTATTGTCTAACAGAAGTTTAGGGGCTATTTCTAGGTATTGATCATGAAAATGTCTAACACAAGTATGTTTAATATCATTACTGCAAGGACAAGCAAGGCATTGAATTCATATTCAGCTCATTACCTAAATTATGACTCAAGACTCAAGAGCAAATGATCAGATAGAGGCTCAGTCATTCAATTCTCCTTCTACATCATTTGCCTTTTCTTGAACAAAGTAGAGAACCTACCCCCCACGTAATTACAGAACAACAAGGACATTAGCCTTTTTCCCAGGCGAGTTGGGATAAGCTTATTTCCCAACTTAATTATCGAACATATTTCAAATGCCAAGTTTGCAGACATAACATATACCTGAATTATATCATCCTAATATGCAAGTCACACCAGAGCTAAAAAGAATTTTATCCAAATATCATTGAACATCCAAGATTTTACACATGAACTGAGGTGGCATAATACTATTGCATTGCAACTAAGTCAGATTTTTTTTTATGCATGAGTATGTGTATCATTTCATTAAGAAGGAAGAAATGACAGGGGAGTGGCTAAAGCGCCTTCCACCCCCAAACAACAACAGCAGATTGCTACACAAACACAACTCACTTGAACTGACCTTACCCAACTGGAGTAAGCGACTTTCTAAGGAACTCGCCGAGCTTAGAGGCCTCGGCCAGAAATGGCATCATTCTTACCCAAAAAACTGTGGGAACAAAATTGGCATCCAACATTGTCTTGAATCCATGTATTACTGATCATCTGCGATATCCTGTCACAAAACGTTTGATGTCTGCAAAGTCTAAAACTGCTTCAACATCACGAAAAGAAGAATCCCACTTAGTCTGTATGAAATCGACAAGAAACTCTGACTGTTTGTTGCCGTTTGTCTCAAAAACAAAGAAACCACCAGGCTTAAGTACTGATGACAATCCTTCACAAAGATGAAGCAGATGCTCAAGTCCATCTTTGCCTCCATCAAGTGCCAGCTTTGGTTCATGCCACCCAACTTCAGGTTGCAGGCCAGGTAGATCTTCAGTTGGTATATATGGAGGGTTACTAATCACACCCATGAGCTTTCCCTTCAGATCTTCTAGAGGCTCAAACCATGAGCCATGCCTTATCTCAACTTTATCCTGCATCCCGTATCTCTGAACGTTGAGCCGAGCTACGTCAATGGCGACCTCGCTGACATCAGTGGCGAACACCCTCCCCTCCGGGCCGAGCATCCTCGCCACGGCCACGGCGATGGCGCCGCTGCCCGTCCCGAGGTCGGCCCACCACCCGGCCTCGAACCCTTGCACCTTCGCGACCATGTCCACCACCGCCTCCGTCTCGGGGCGCGGGATGAGCACGCCTTCCCGGACGGCGACCACCAGGTCCCTCCAGTGCTCGTTCCCGACGACGTACTGGAACGGGCGGCGGTCCCGGACGTGGCGGAGCCAGAGGGACTCGAGGTCGCCGAGCGGCGCGCGGAGGAGCGCCGGGTCGGCGCCCGCGTCGCGGGCGGCGGCGTCGGCGAGGAGCCAGCGGAGGTGGCGGTGGAGGTGCGGCGCGGAGTCCGGCACGAGCTCCGCCGCGCGGCGCCGGAACGCGGCGAGGGAGGCCGCCGCGACCGGGTGCGCCGCCGGGCGGAGGAAGAGCGGCGTGGTGTCCGCCTCCGCCTCCACCCCCGCGCCGCCGCTCCGGGGGCTCGGCGGCGTCGACGCGGAGGACGAGGCGGTGGCGAGGCGCTTGAGAAGGCGGGGCGTCGGCTTGGGCTTGAGCCGCCCCGGGAGCAACGCGGCGACGCCAACGGCGGCGGCGGCGGAGGCGAGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0137400.1 | 12 | 25912605 | C | T |
| Osa12LNT0137400.1 | 12 | 25911722 | T | C |
| Osa12LNT0137400.1 | 12 | 25911276 | G | C |
| Osa12LNT0137400.1 | 12 | 25911325 | A | C |
| Osa12LNT0137400.1 | 12 | 25912384 | G | T |
| Osa12LNT0137400.1 | 12 | 25914009 | C | A |
| Osa12LNT0137400.1 | 12 | 25914567 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0137400.1 | osa-miR5528 | Cleavage | 5.0 | 11.179 | 1 | 21 |
| Osa12LNT0137400.1 | osa-miR5528 | Translation | 4.5 | 11.978 | 1 | 21 |
| Osa12LNT0137400.1 | osa-miR5821 | Cleavage | 5.0 | 24.09 | 1 | 21 |
| Osa12LNT0137400.1 | osa-miR171c-5p | Translation | 4.0 | 15.258 | 1 | 21 |
| Osa12LNT0137400.1 | osa-miR1441 | Translation | 4.5 | 13.262 | 1 | 21 |
| Osa12LNT0137400.1 | osa-miR2866 | Cleavage | 5.0 | 19.45 | 1 | 20 |
| Osa12LNT0137400.1 | osa-miR812o-5p | Cleavage | 5.0 | 15.449 | 1 | 21 |
| Osa12LNT0137400.1 | osa-miR5492 | Cleavage | 3.5 | 19.395 | 1 | 21 |
| Osa12LNT0137400.1 | osa-miR5791 | Cleavage | 4.5 | 15.952 | 1 | 21 |
| Osa12LNT0137400.1 | osa-miR1866-3p | Translation | 5.0 | 9.724 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0137400.1 | 12 | qLEI 4 | Resistance or Tolerance | Submergency tolerance | RM5479 | C901 |
| Osa12LNT0137400.1 | 12 | nan | Resistance or Tolerance | Submergency tolerance | R1709 | RM235 |
| Osa12LNT0137400.1 | 12 | nan | Resistance or Tolerance | Submergency tolerance | RM5479 | RM6953 |
| Osa12LNT0137400.1 | 12 | qSD12 | Physiological trait | Germination/dormancy | RM3331 | RM235 |
| Osa12LNT0137400.1 | 12 | qLEI12 | Resistance or Tolerance | Submergency tolerance | nan | nan |
| Osa12LNT0137400.1 | 12 | qNEI12 | Resistance or Tolerance | Submergency tolerance | nan | nan |
| Osa12LNT0137400.1 | 12 | qTIL12 | Resistance or Tolerance | Submergency tolerance | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)