© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0137700.1
GAAGAAGGCGACAAATGATTGATTTTAATATGTTCCGGGCTCCATTTGGAAATTGGAATCATCAGTTCTAGACATCATATTATAGCTACAGAATAAGGTCAATTCTACAGCGACTGCCATCATTCATCATAGAACTGTTCTTGCCTAGTTGCCTGCCATTAGAGATTTAATAGAGCTAAAGCAGCTATCATACAGCATGTCCATGATCAGATGGAATACAACGGATCATCTAGCTATATTATTGACTGAGTTGCTACTGATTCGGACAGGACTAGTGAAGATCGCATGGAATGCAGGCGATCACGAATGGTGACCCTGCAGTCTTAAGGGTGCTTAGTTTGGATTCTGGTCTACATCTCAGTAGTCCAGAGGCGCTACAGATGCAATGTTTCCGGCGATATTCTGCATGTTGTGGCTTGCAGAATAGTCGTCGCAGGCATTGCTCTGCTGCATCCTTGCTCCAGGTGAGGACAGAAGGCCGTCTCCACCACGAACCAACTGCTGCACCTCCTGTGGCGAGAGTATTTTGATGCACCATACGCTATTTGCAAACTCCTGCCATGGATCGTCGCCGACGAGAAGAATGTCATTTTCCCGGTCGACAAATACAAGCTGCCAGCCTGATCTTACAGGGTCCTCCAGTTGGCCTTCAAGACCAAAGAGACGCTCAAGCTCACTACGTAACTCGCAGTAGCTGCTGAATCTGGAGATGTCAAGTGATCTCCCAAGGGACCCTGATTTGTAAACCTTCACAAAGGTTGCTCCTTGTGATGGATTTACAGATATGTTATTAAGAGGATTGAACGTTCCAGATTCACCTAAACAATTGGAGGTTGCTAAGGTGTTTTCAGTTGTCAAATCTGCACCACTATATCTCAACAAAGGTATGGCCATAGTATCAGTTTCTCTGTTAGCATCAGTTATGATGCTTGTCATGCCATCCTGGAGTTCAAATGATGATGAAAGTAGGCGGTTCTCAGCATCTGCCCTGCAATCCTGGACGATGGAACAGCCTCTTGCTGATTGTGGTGGAAAGGCGCCAGGAAAATGAGATATACCCTGGTGATTTACTTTCTCAATCTTGGGGTGCATGGACGGAGCTTCAGGATGAACAGCAGATTCTAAAGTTAATCGCTTTGAAGGCCACCCATCTGATGCCATTAATTGGCTACTTCGAGGCAAAATAAGAAGGTTTGAGGCTTCCTGGTTAGAGAAGTTGTGGAAATTGTTGTGTAGATGTAAAGGGGGATCACTATTTCCTTCTAAGAGGTTCTGATTGTAGAATGATGATCCACTAAGCAATGATGATTGTGCCTGAGGAGCAGATCCAGACTCAGAAGCTACATCAGCAACATGATGATCACTAGATGGGAGCTGCTGTTGCATCTCTTGACTAGATTGCTCTTGTAAAACATGCTGTCTTTGCTGCTGCTGCAACTCTTGCTCCTTTAGCAGCTGCTGAGTGTTATGCAACTGCAGCCGTGGAAGCTGACCTTGAAGGAACCCAGAGTCACCAGTGTTCTGACAATGGCCTTGCTGAACAACTTGCAGGGGTGACTGCTGAGGTTGAAACTGCACCTGCCCTAGAACATGGCTTGCAAACAGAGAATTTAATCCACTGTTCAGATTATGAGTCTGTTGGTATTGCAGAGTAGCTGGATGCTGCTTTGAAGGGTCCCCATATCGAATTTCTTCCAGTGCTGCTGCAGCCATTTGCTGGTACGTGTCTGGCTTAAGGCCCAGCAATGGAGAATCTATTCTTGGCTGAAGCCATGGTGAGACTCCATGTCCTTGAAAATTCAGGGACTGGGTTCCTCTATTTCCGTCTCGAAGCCACATGAGAGAAGAATAGCGTGCAAAATCGTCATTTCCCCCACCATTGAACATGCCATGCATAGGCAGTCCTGAAGCCCACGGACGCTTAAGTCTTAAAGGAAAAGCACTGGGGTACATCGGAAAGGTTGTCAAAGGCTCAATCTCCCAAAGAGAAACCCTTGGCTGTTTATCACCAGTGGTGGACTCATCCCAACCAACCTTAACAGAACGCCAGTGTGAGTTTGGCCAGCGCACTGAATCTAGATCACTTATGCTGGTGATTGTACCCATGTATCGCCTGACACTTGACTCCTCTGTCTCGAAAAGCATTCTAAAACGCATTCCAACAGATACACGTGTGTGGTAAACAGCTTTCACATACTTGGCCAATGGAATCACAAATTCAGAAGGGCTAGCCCTGGGGTTATAGAAAATAGTGAAGCGACTATTTGTGGCTGCAGCATGAGCTGCTGCTGCAAGAAGACCTATATGCATGCTATCGCTTGACAACACGGAAGAGGGCATAACAGTCTGTTGGCGATTTGCACGACGTATTCCCAAAAGAAGTTGATTGTTATCATTCCAGATAAATATAACAGAGTCTCCTGCTACTAGTCTTTTCGCACTCACAAACACACTCCAGCCTGTTGTCAGGAGATGCCTTTTAGGCTGACCACGAAATATATGGCGAAATTTCCATTCATTATCATGCAAATCTCTTGCAATCAGCTCCTGTGCCGGAGGCTGCTGTGAAAAATCTAGTGGAGGGAAGACTTTCTCAGCTGCCCGGCGGGGAACAGAGAAACCACCATGAGTGCTCGTGTCACTTGCAGTCAATGTCTTGCAGAAGTAATTAGTGGGTTGCTTGCTAGCAGCACCCAACTCCATTGGAAGGAAAGGCTCCTTTTGCTCTTCCGGGCTCAATGGTTGCAATGTCATCTGAGCATAAACTTCATCTGTCTCTGCATCAGCATGCATGGTGACATTATGAAGCTGGCAGATTAACTGAGGAGGTAAGTTTGGATAATTTGGGATTTGAGCATCAACTTCCTTATTAGTTGATGCCGCAACCTGCACAGAACTGCTCGCTATGGCCCTGTGGAAAGTAGACGACCCTGCTCCTGACCACTGGCAAAGACACAAGGGGCCCAGCGCATGCATGCCACAGCTCCGAGTTCAGACATCTTTGTTCCCCGTCGTTCTCCGGCAAGGCCTGCGGCATATCCGCCGACGCCGGCGGAGAGAGCTTCATCTCCAATCACCAGTGCACCCGTCGCCAAAGAGCACGAAACTCCGCCGCACCAGGATACCGGAGAAGCTGCTGGTCAGCTTCCCATCATGCTCCCAGCAGCAGCAGCAAACACCTGCCTTCCTCTCTTGCGCCCAGAAATATCTTCCATTTTTTTCTCCCTCAACAACTAACCAAAACCTGGACCGTCGCAGCAAATCCTCCCCTTCATCTCCCCGAAAAAATTCCACACAAACTCTTTAAATCAATCAAACTTGGAAACCAATCACCCCCCTCAGAGCTCGAGTATTTTCACCCAAAACTGATGAAAAACACCCAGGCGACCGCAACTCGATCCGAAGAACCGGATTTTCGCCAACGGCGGGAGCAAGTGAGCGGAGAAACCGAAGAACGCCGCCGACCCCGAGTTCATCAGATCAACACGCAGCTCATCCCAAGCACTCAAAACACAGCACCTTCACTCTCGGCGACGGCTAACCCAAACCGCCGCCCTCAAATCGCCACCGACACTAGCCCGCAGCCGCCGCCGCCGCGGACGAGTCCAGCCTTCCTCTCAGGCGCCGCCGCCGCAACCGCGCACCCCCCGGAGCTCACGAGATCGCGGAATCAGGCGACGACGACCACCACCACCACCAAACGGCGTAGCATTCGGCGCCGGCGGCGGAATCAGGCGGCGCGACAGCGAGGCGGGAGCTGGGGGCGCGCGGTCTCCGAGACGGCGGGGAGGGTGGTGGGGGCGCGAACCCTAGGTGCTAGGGCTAGGCCGCCATGGCCGGATCGAGGTGTGAGTGGTGGAGGTGGTGGTCGAGTTTTTTTTTTCTTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0137700.1 | 12 | 26003232 | A | C |
| Osa12LNT0137700.1 | 12 | 26003777 | C | G |
| Osa12LNT0137700.1 | 12 | 26004589 | T | C |
| Osa12LNT0137700.1 | 12 | 26004928 | G | A |
| Osa12LNT0137700.1 | 12 | 26005196 | G | A |
| Osa12LNT0137700.1 | 12 | 26007863 | G | A |
| Osa12LNT0137700.1 | 12 | 26005358 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0137700.1 | osa-miR1861o | Translation | 5.0 | 22.394 | 1 | 22 |
| Osa12LNT0137700.1 | osa-miR5079b | Cleavage | 4.0 | 18.952 | 1 | 22 |
| Osa12LNT0137700.1 | osa-miR396a-5p | Cleavage | 4.0 | 13.533 | 1 | 21 |
| Osa12LNT0137700.1 | osa-miR396b-5p | Cleavage | 4.0 | 13.533 | 1 | 21 |
| Osa12LNT0137700.1 | osa-miR396c-5p | Cleavage | 4.0 | 13.533 | 1 | 21 |
| Osa12LNT0137700.1 | osa-miR171d-5p | Translation | 5.0 | 16.342 | 1 | 21 |
| Osa12LNT0137700.1 | osa-miR530-3p | Cleavage | 3.0 | 18.594 | 1 | 21 |
| Osa12LNT0137700.1 | osa-miR1861a | Translation | 5.0 | 22.394 | 1 | 22 |
| Osa12LNT0137700.1 | osa-miR5079a | Cleavage | 4.0 | 18.952 | 1 | 22 |
| Osa12LNT0137700.1 | osa-miR5150-5p | Translation | 3.5 | 21.647 | 1 | 24 |
| Osa12LNT0137700.1 | osa-miR2094-3p | Cleavage | 3.5 | 18.915 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0137700.1 | 12 | qLEI12 | Resistance or Tolerance | Submergency tolerance | nan | nan |
| Osa12LNT0137700.1 | 12 | qNEI12 | Resistance or Tolerance | Submergency tolerance | nan | nan |
| Osa12LNT0137700.1 | 12 | qTIL12 | Resistance or Tolerance | Submergency tolerance | nan | nan |
| Osa12LNT0137700.1 | 12 | qLEI 4 | Resistance or Tolerance | Submergency tolerance | RM5479 | C901 |
| Osa12LNT0137700.1 | 12 | qSD12 | Physiological trait | Germination/dormancy | RM3331 | RM235 |
| Osa12LNT0137700.1 | 12 | nan | Resistance or Tolerance | Submergency tolerance | R1709 | RM235 |
| Osa12LNT0137700.1 | 12 | nan | Resistance or Tolerance | Submergency tolerance | RM5479 | RM6953 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)