© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0137800.1
ACGAAATGAAACTTCAAAAAAGCTTCTGTTGGAGTTCATTATCATTCGAATCAGGCTTTCTCCAATTGACAAGGGCTACGACACTGGCATTGACAAGAAATCTTCAAGTGGTTTGCACAAGACAAACATACAGGAACTGGGATTCTGTGGGGTGCTGCAATGAAGCAGCTGCTTTGCCTTTTATTACTACTACTAAATACTAATATTTGGAACCAGGTTTGATGAATTATTCTACTGTACCTAGTGAGTTTGAACTATGACCAGTACGCTGTCAAAGCAGCAGCATTTGCCGTTTCTCCTTTCAGTTTCTTATCAAGAGGAGCTGAATAGTAACGGCAACTGGAAGCTTAATGCAGGTTACTGAAGAAGCAAATGCCCTTTGTCAAATTTACAGATCAATGTAGACGCGCAATCCATCACGGGCTAACTGCACATCTATCCCCTCCCTTCTGGACCACTCTTCCAACGTTTCATTGTCCTTGTGATGGTCCATCTCATGAGTCATCCCAATGAGCAATGCCCTTTTGGGGCAAATCCTCTTAACAGCATCCAGTGTCTGATCCCAACAAAGATGGACATTATGAGAACCAGTCCTATAAAGGCAGTCCAAGATGAGCAAATCCAGCTGACCCTCTCCAGACTTTGAAATTGCGTGTTCTGTGCTTGGAGGAAACCGTGAAACGTCTGATATATAAGCAACTTTTGATTTTCTTCCAAAAAGGAAACCCAGACAAACATAGTCCTCGCCATGGATCACCGGCAGGGGAACAAACTCTAGCCCTGAGGTCACAAATGGTTTCTGAAGATCACTCTCGATTACTCTCCAATCAAGCTGAGCAACTCGCCGAACCTCTTCCCCTTCCTTTAGTTTCTTTCTGACCAAGTAAGGAAACTTTTGGGCAATGCTGTTCATAGCAAATTGGGATAGATAAATTGGAGTTGGCTCAATATCATTCGTAGGACTAAATGGCTGTACAATCCGAACATCATCAAGACCCAAGATTGCATCGGCATGCTCATGAGTCAGAATAATAGAATCAACACAAGGGATTTTATGATGGATAAACCACCGTAGAACTTGTTCTCGGAATGTCTTCCCAACATCAATTAGAATATATTTGTGTGTGACTTCATCTTGGCAATAATCAATCAGAAGAGAAGTATTGCACCTGTAGTTAGGGTTTAGCTCGGGGGGCACGGAGAGGGACTGGGAGCAGACGGCGCAGGGCGGGTCGGGGGGCTGGATCAGGCACCGCGCGTTGGGCACGGCGCTGGAGCAGCCCGTCCCGAGGAACACCAGCGAGGAGGAGGACGGCGGCGGCGCGGGCGTCCCTCCTTCGCCGGCGACGGAGTGGCCGTTGGGGACGGAGGCGGCCATTGGCGGCGAAGACGAGGCCTCTCTCCTCTCCGCCGGCGACCGTGGCGACGACGACGACGAGTCGGTGAGGGGAGGAGAAACGGAAACGGAATCAGGGGGAGAAGAGAAGATGCGGAAATGGTTTGGGAGGTCGTTTTGCAGATAGGTACCTGAGGTGGATGTTATTTCTGGCTGGGTGGTTTTTATTCATTCAAAAAGACCCAAATGGCTTCTCAAAAAAAAAATTGACCCAAAAGACTTCAGAATGGAGACCTATAAGACTATAAAAGCAAGTTTAATGGTATAGCCGACTACTAGCTCCAAATCATCTATAATCAATTTAACGTCAATTCTTACCATAGTTACCTATAAATATATACTACACTATTAGTTCAACATGTCATACATACATTGCATCTTGGAGTCTGTGCTATAGCTGGCTACAAATCTGTAGCCCGCTGCTTATCTCTCTCTTTTTTAATCTCCTCGATATGTGTTTATAGCAGACTTATAGTCTATTATTGTATCTGCTATGAGAAAAAGGAAGCCCATAAGATTTGCCACATGGATAAGTATTTGATTGTTTGCATCTAAAAGCAATGTTCTTTGATTAGAAAATTATCTTTGATTGGCTTCTTTGACGTTTGTGCCAGCCAATTGATTTTATATTACATACTCGATGTGCTAATTGTAACCAATTGCAACTTTATACTTCCTTTACCTTTCTTGTGTGTGTTTTCATGAATCAAATTTGACGGCGTCTTGCTCTTCCAAAAGCAAGGTTAGGTGTTAAGAAAGGCATAGTGTGGTAATGCACATGAATATTCGCTTTCAATGGCATATGCCACGCTTGTTTTTTTATTGAAGTCCTTTTTTTTAGCGTGGTTTGTACTTTAGATTACCATGGTGTGAACTAATATATTTGTGTTTGTGTATTTTACGAGGAAAGCGTTTGCTACGACCTGAGCATTTATCTAACTGAAACAAATTCACCTACGAGGTTGCCTTTTGTAAACGGTTCTTATCAGGCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0137800.1 | 12 | 26104721 | T | C |
| Osa12LNT0137800.1 | 12 | 26104771 | A | G |
| Osa12LNT0137800.1 | 12 | 26106642 | A | G |
| Osa12LNT0137800.1 | 12 | 26106795 | T | C |
| Osa12LNT0137800.1 | 12 | 26108414 | C | T |
| Osa12LNT0137800.1 | 12 | 26108999 | T | G |
| Osa12LNT0137800.1 | 12 | 26109132 | C | T |
| Osa12LNT0137800.1 | 12 | 26109149 | T | C |
| Osa12LNT0137800.1 | 12 | 26109201 | A | G |
| Osa12LNT0137800.1 | 12 | 26109442 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0137800.1 | osa-miR812s | Cleavage | 5.0 | 15.475 | 1 | 24 |
| Osa12LNT0137800.1 | osa-miR5079b | Cleavage | 4.5 | 16.89 | 1 | 22 |
| Osa12LNT0137800.1 | osa-miR396e-3p | Translation | 4.5 | 17.148 | 1 | 24 |
| Osa12LNT0137800.1 | osa-miR812a | Translation | 4.5 | 15.652 | 1 | 22 |
| Osa12LNT0137800.1 | osa-miR812b | Translation | 4.5 | 15.652 | 1 | 22 |
| Osa12LNT0137800.1 | osa-miR812c | Translation | 4.5 | 15.652 | 1 | 22 |
| Osa12LNT0137800.1 | osa-miR812d | Translation | 4.5 | 15.652 | 1 | 22 |
| Osa12LNT0137800.1 | osa-miR812e | Translation | 4.5 | 15.652 | 1 | 22 |
| Osa12LNT0137800.1 | osa-miR169r-3p | Translation | 4.5 | 19.948 | 1 | 21 |
| Osa12LNT0137800.1 | osa-miR1850.1 | Cleavage | 3.5 | 13.393 | 1 | 21 |
| Osa12LNT0137800.1 | osa-miR1862e | Cleavage | 3.0 | 13.805 | 1 | 24 |
| Osa12LNT0137800.1 | osa-miR2103 | Cleavage | 4.5 | 18.657 | 1 | 22 |
| Osa12LNT0137800.1 | osa-miR5079a | Cleavage | 4.5 | 16.89 | 1 | 22 |
| Osa12LNT0137800.1 | osa-miR5338 | Cleavage | 4.5 | 11.651 | 1 | 21 |
| Osa12LNT0137800.1 | osa-miR1862d | Cleavage | 4.5 | 13.568 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0137800.1 | 12 | qLEI 4 | Resistance or Tolerance | Submergency tolerance | RM5479 | C901 |
| Osa12LNT0137800.1 | 12 | nan | Resistance or Tolerance | Submergency tolerance | R1709 | RM235 |
| Osa12LNT0137800.1 | 12 | nan | Resistance or Tolerance | Submergency tolerance | RM5479 | RM6953 |
| Osa12LNT0137800.1 | 12 | qSD12 | Physiological trait | Germination/dormancy | RM3331 | RM235 |
| Osa12LNT0137800.1 | 12 | qLEI12 | Resistance or Tolerance | Submergency tolerance | nan | nan |
| Osa12LNT0137800.1 | 12 | qNEI12 | Resistance or Tolerance | Submergency tolerance | nan | nan |
| Osa12LNT0137800.1 | 12 | qTIL12 | Resistance or Tolerance | Submergency tolerance | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)