© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0010900.1
GACAAGGGAGTAAATATACACATTCATTGAATTTGGACTTTTGCCACGGCACAGAAACACTGAACAAAATGTGCCTTTGTTCAATACAATCAAGAAAAGGAATAATAAAAAGGAATGAAAATCCTCTATCCTATTAATCTAGCTATAATAAGGAACTATACAGGTATTTACGGGAACATGTCAGATTGCCTACGTAAGGTTTTTGCTATGCCTCCATCGAAAGTCGAAATAGGCGATTCAAGAAAATACGAGGATAAAGTTGATCCCCAAACCACCACCATCTGCATGCCTTCATGCAAATACTGGGGAAACCAGCGAAACTATGCTGCTATTGCCACTACTGTGCCACTTACTATGGTCAACACCAGCTTATTGCATCTCTAGCAACAAATTGTATTGTCTAACAAAACTTCTACAAGTTCACATGAAGCTCATCCAGATATACTAAGGTCTGTCATGCTTCTGTCAGCAATATATGCCTTTATATCCCTGCATCTGGGAGCTGAACAGTCTGCATTGTCACAAAGCAGTGAGTGCGTGAACAGCAGTTTCCACATGAATACACACATATGGCAACCTCCTCCACCACGGGCACGGGTATGACATCGTACACCATGGAAGAACAGTTTCTTTAACGTCAAACAAAGTTTGGAAGTGCAACTTCGATCAAAACATCTTGATGCATGCACCAAGCCTTCAAGGTAGTCCTGCTGTAGAGTGTACTTCTGCAATACGTGATGGTCTTTTTTCTGCCTCAACTTATGAATATGCAAACTTTCACCGTCTTGTTTATAGCATGAATCACAAAAGTTGCAGCCTAGGCAAACCAAGCACCGCCATGCCAAGCATTGATCCATGGCACGGTGACAAGAAGAACAAGTTGAATCATGTAGATGATAAAGAATCATCATTGTGGAATGTTTTGCCCTCCGGAGAGTATCAAACTGGTATTGATTGTCTTGACAATGCTTCAGGAAATCTATTCTGCTGTCAAAGTACTTGCTTTCCATTGTTGGATCTACATCATCCGTTTCTGGAAGAGGTTCTTCCTCTATTCTTTCAAATGCATGCTTTTGTTTTGTTGTAGCTGGGTGCCTGTCCTTCAGAGGGGTATTCAGCTCCTCAGCATAACAACGTTCACAAAGAAAGAAGTTTTTGCAGCTGGTGCAAACCCAACTACTACCAGATACAATAGGATGGTGGCAATGCTTGCAAAATTGCTGCAGACAAAGCATTAAAAAATCTTCTTTCATGGTTCGCAACCTTTCTCCAAGCTTATGCACAAGTAAAATATCCTCGAGGTTTCCTTTCCGGTCATCACGTTTGGCAACCCGTAGAAGCCTTCCTAGTTGAGTTTCTTTCTTCTGTGAGGTGTCATCATCTTTCTTTTCAAGGAGCCTCTCTGCTTCCCCAGGCCAGAAATCATTATCACAGTATGGCAACCATGCAGCTGAGATATTGGTCTTGCATTCATTGGTGGGCTGAAGGAAGAAGTCATAGAGTGTATTCCGTTCCACAACTACCCCCTCCTTAACAGCCTTCTTTACCAAATTCTGGTACCAGCTCCGAAGCTTGTCAGACTTTGGCATCTTCTGTATTGTAGGATGACAATATAAAACATAATCGTCACGCTTTGTAGATGGGCAAGTCCATATGGAACAGCTTACAAACCCTCGTTTCTTGCAGAAATCCAAGTAGCCAATCAAAATTTCATGATACACAAAGGTACGGAGAGCTTCTCCACTGGCCGACTTGATTTCCGGTCTGAAGTACTTGACAGAATCAATATATGCAAGATAAACGTGCCTTTGATTTGGTGATGGGCAGGCTGAACCATACTCTTGCACATACATGGCGAACAGGCATACATCTACACCTTCATTCTTTTGAAACAAGAGAATGGCCTTTGATTTGTACGGAAATTCCCCAGGATATTGTTCTTTTTTAAAAAAATCCTTGAAACGTGGTTGGACTTGCAGTGTTCTATCAGCTGAAGATACCACTCTAACAGTAAGACCTTCAACTCCTGGTACCTCATCAACACTTTTTCCAGAAGCAATTGCCCTCTGTTGCCGCTCCTGCACAAGCCGCTCAGAAAGCCTTTGCTCAATATGATCACTTAGTCTAGTTCTTGGTAACTCGCGTGCTCCCAGAATAGTAGATGGCTCAAGTGAATCAACATCTTCATTATCCTTTTCCTTCAAGAAACATTTTGCACAAGTATATTCAGCCTCTGGATCCACGATTTTGGGGTTAAAAAGTGCGCAGATTTGATGCTGCCAAGCTTTGCACTTATCGCACTGGACCCACCATTCTGCCTCAGCATCTGTCTCTGCATAGCTGAATCTCTTCTGATATTTGGCTTTGGCACTACTAAGATGGTGGCATCTGCCACATATTGAAGATTTGTCATTTCCATTTTCCACTTCAACATAATAGGATCCTGTAGAATTAATTATTTTAAAACAGAGCGCGCAAAATCGTGGAGGGGGCTCAAAGAGGAGTCTTTCCATCCCACATAAATTGCATGTGTTCTGATCAGGCAAGCCTTCAACTGATAGCAGCTCTTCAGTCGGCACTTTGCTCTGAGAAGTATCATGGTTCAGAGTACACAAGTGATCTTTAAGCTCCTCAGAAGTTAATGCATAAAGTACTGAGGCCCCTCTTCTCTTCCTTGCCCTCAGGCTGTCCCCTGACAATGTTTGGTCCAATAAATCAACCTTTGCATCCTTCATCTCAATGTCACTATTTTCACGACGAAATTCTTCTTCAGTTTGTACAGCACTCCCCGACAATCTGACCATATCCATTCCATGTACATTATCGGTGCAAGCAATGTTGTCCCCCAAGGAAGTACAACATGGTGATTTTGTTGGTGAATTAGTGACTTCAGATTGTACTGTTTCAGCAGATGCATAAGTCTCATTGGCAGCAGGTTGTTGTTCCTTTGAAGCCTCCATTTCATTGACATGGACAAGATGGGGAACATCAACTTTCAAGCGTTTTGCTGGATAATGCTTGCCAGAAGATCCATCTGAAGCAGGTGAAGTCGGCTTTGATACAGTACTATTTGATGTCTGTTCAGCTCTATCCACTGTCTTGCTTACAGGGCTACAAGCACCATAATTAGTCATGAAGCCCTGCTGATGATGCATAAAGTGGTTGCTTAAATTTGAGCTTTTCTCCCTGGAGAAACCTTCATGATCAGAAGTATGCCCAAGTTTTTCTTTCATTTGAATGCATCGATCCCGTTTGTGCTCTCCATTGATGTACGGATGAATTTGAGCATGATACAAGTCACGGTTTCCAGTGGTAATGTTTGACTGATCTGATTGCTCTAGTGACCGACTCCACGTCTCTTGCTTCATCTCACATTCTATGTATTGTTGCAACAAAGGTCCCTGACCGGTTGTGGGATACAAACTTTTATTGTTTGTGGAAAGGTTTTGTCCGTTCACTGTTGAGAAAGAATCCATCGGAAGTGTTCTCATTGCACTAGAACATGTTGTTTGATCCCACACTGCTGACAAAGAACTAGAACTCCCAGAGGTTGATGGTTGTGAACTATCATTTTGATACGCATCACCTGAGAAATGTTCTTTTATATGGCCAATATGCAGTACATCAATACTAGGGCTACATTTCGGTAGAGTTGATGCACATGAGGTAAAAATGGTGTTTGCTAATCTTTCAGGCATCTGCTTGGGTTTATCAGCCAACGAATGAGCAAAGTTAGCAGCACCCATACAGTTTTCATATTGGTTATATCCCTGAGTGGAGGATACATTATATGCACAGGAGGGCAGATTATTAGGTCCAGGAGTAACTCTATCATGGTAGATGGGCACCTCCATCACAGGCAGCTGTTGTGAGTTTAGTTTGGATGAAGCTGCTGAAGCACTCCAATGAAACATACTACCCCGAAATGATGCAGAATTGACGATAGCATTCAACCTGGTTCTTAAAGTTTCAAGATCCATATACTTAATCTTTGAATCAGCTTTCTCAAAAAGATGTCGGTCAATACATTTTCCAATTTCCATAAGAAAGGATAGGTCAAAGTTGCAGAATTCCTTCCGCTCATTTAGGTACTCTACAATTTTACGGTGAATAATATTGCGAACTACGGATGTATCTTGATCCATATTATCCAACTGAAGAATTTCAGCTGCAGATTGTGTCCAGCCACTTGTGGGGTATTGCTGGGTAGGAAATCCACTTGCTGCATATTGCTGTTGAGTCCCTTGCAGGGTCTTTGCCATCATGCTTCTATCTCGCCAGGATGCAGCAGGACGACGGCGCCCCTCCCTCCCCGGCCTCTGCTCGCCAGATGGAGATGGGCGCCCCAACCCTAACCCTTGCTGTGCTCGCGAGATGGGGGATCGGCGAGGACGAAAGGGGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0010900.1 | 1 | 8053241 | A | G |
| Osa01LNT0010900.1 | 1 | 8053478 | G | A |
| Osa01LNT0010900.1 | 1 | 8048306 | G | T |
| Osa01LNT0010900.1 | 1 | 8053079 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0010900.1 | osa-miR5543 | Cleavage | 4.0 | 13.357 | 1 | 21 |
| Osa01LNT0010900.1 | osa-miR5143b | Cleavage | 5.0 | 15.542 | 1 | 24 |
| Osa01LNT0010900.1 | osa-miR5818 | Translation | 5.0 | 12.323 | 1 | 21 |
| Osa01LNT0010900.1 | osa-miR6247 | Translation | 5.0 | 22.432 | 1 | 21 |
| Osa01LNT0010900.1 | osa-miR7694-3p | Cleavage | 4.0 | 21.283 | 1 | 22 |
| Osa01LNT0010900.1 | osa-miR160e-3p | Translation | 3.5 | 13.953 | 1 | 21 |
| Osa01LNT0010900.1 | osa-miR416 | Cleavage | 4.5 | 19.125 | 1 | 21 |
| Osa01LNT0010900.1 | osa-miR416 | Cleavage | 5.0 | 19.146 | 1 | 21 |
| Osa01LNT0010900.1 | osa-miR530-3p | Cleavage | 4.5 | 20.331 | 1 | 21 |
| Osa01LNT0010900.1 | osa-miR814a | Translation | 4.0 | 13.654 | 1 | 22 |
| Osa01LNT0010900.1 | osa-miR814b | Translation | 4.0 | 13.654 | 1 | 22 |
| Osa01LNT0010900.1 | osa-miR814c | Translation | 4.0 | 13.654 | 1 | 22 |
| Osa01LNT0010900.1 | osa-miR1428a-3p | Translation | 4.5 | 24.953 | 1 | 21 |
| Osa01LNT0010900.1 | osa-miR1441 | Cleavage | 4.5 | 21.032 | 1 | 21 |
| Osa01LNT0010900.1 | osa-miR1853-5p | Cleavage | 5.0 | 15.986 | 1 | 24 |
| Osa01LNT0010900.1 | osa-miR1855 | Cleavage | 4.5 | 14.443 | 1 | 21 |
| Osa01LNT0010900.1 | osa-miR1428e-3p | Translation | 5.0 | 24.953 | 1 | 21 |
| Osa01LNT0010900.1 | osa-miR2093-5p | Translation | 4.5 | 20.624 | 1 | 20 |
| Osa01LNT0010900.1 | osa-miR2093-5p | Translation | 5.0 | 18.507 | 1 | 20 |
| Osa01LNT0010900.1 | osa-miR2099-5p | Cleavage | 3.5 | 10.289 | 1 | 22 |
| Osa01LNT0010900.1 | osa-miR2871a-5p | Translation | 4.0 | 12.917 | 1 | 24 |
| Osa01LNT0010900.1 | osa-miR2929 | Translation | 4.0 | 16.88 | 1 | 21 |
| Osa01LNT0010900.1 | osa-miR5081 | Cleavage | 4.5 | 23.864 | 1 | 22 |
| Osa01LNT0010900.1 | osa-miR5143a | Cleavage | 5.0 | 15.542 | 1 | 24 |
| Osa01LNT0010900.1 | osa-miR5513 | Cleavage | 5.0 | 11.118 | 1 | 21 |
| Osa01LNT0010900.1 | osa-miR5524 | Cleavage | 3.0 | 13.132 | 1 | 21 |
| Osa01LNT0010900.1 | osa-miR5524 | Cleavage | 4.0 | 10.806 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0010900.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0010900.1 | 1 | An9 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0010900.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0010900.1 | 1 | nan | Morphological trait | Root | RM7383 | RM23 |
| Osa01LNT0010900.1 | 1 | Rf | Physiological trait | Sterility | nan | nan |
| Osa01LNT0010900.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0010900.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0010900.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)