© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0137900.1
GCAATACTATTTCTGTAATTCTCTGTGCGTACCTGAATTGGTACAGGAATTAATGTTCGGTCCGATATACGCTACAAATACAGCACAATTGTGTAAGGAATGTGCATCTATATATGCATATAGGTGTCGTCCTAACTGAACAAATTAAGGGTCCTGTAAAAAGTAAAAATGCTATTCTGAATTCTGGATGGTGATCCTTCAGTCTGGCACTCTGAGCTGCATCAGTAGGTATATGAGTATCAGGTTTGTCAGCTGAAATTTTTCTCTATCTGCAGCATGATTTAGGATTGAGTGACATATAATCCAGTGATCATATGCCCTTCACTGATAACCATCAATCCAGTCCTCAGAAATATATGCTGCATGTAAGCTATAGGCATATGTCCAATTGCAAGAGAAGTGCCAGGTCTGAACTTCTGCTCTGCCTGGCTACCATTCTATGGGCTTGATCCTAGAAGTGGAAGTTTAGTATCTTGGTTCTTTACTAGTGGCGCTATACAGATTGGTCGATCATTTCCTTGCTTGAATTGGAGGCTTCGCTTTCGTCATCACTAGCTTCCAAGAGACAATATTTGACACCATCTTCAGAATCTATGTTGTTGAAGTCATATCCAGTCTGGTCATTTTCCCCTGTAGTTTCGGGTATTCGGTCCTCTAGAGTTGCTTCAATTAGTGGTATGTTTGGGCGACTACTTAGCCTTAGTGAATCCTCCTGGGCTATCATTCTTGAACCATTCCCATTGCGCTCAACCAAGTCTGATATTCTTATCTCAAGTGGCTTCATGATATCAATTTCTCGATTTTCGATGTTGTTGAGTGCTTCCTGAGCTTGTAACTCCATTGAGTCTCTCACAAGCTTACTAAAGAAGGATACATCATCAGACATGACACCCAGTCCTCTCAAAAGCATCGAGCCTAGTTGCAAGCTAGTCTCAGCGTTTTCCAGAACAACTTCTGTTGCACCTGCTTTCTTTAGATCTAACAAATGTGACATGTCTTGAGCCCTTGCATACATTGGAACGCCAGGAAAAGCTTGCCGCAATCTGTTGACAGCCTCAATTGTCTTTTCCTTTCCAGTATACATGACCATGACAGCTTTCGGAGAAGATACGCCGGCAGATTGCAGAACAAGAGGGCGTGAACCATCTCCATATAGCACTGGAAAGCCTGATTTTCTAGCTGACTTTACGACAGCAGGATTTAGATCAAATGCAACATATGGCCAACCTTCCGCATCTTTGTCAAGCCCAAAAGATAATGGTGCAGACAAAAACTTTGCAAGGACCTTTCCCATTTCTCCAAAACCAAGAATCACAATAGGTTCAGTGGCATCATAATTCACCATCTCAGCTGGTTTTTCTTTTGTTTCTGATTTCTCATCGATGATCCCTGCTGCCCTTCTTCCAATTTCATTGAGTAATGGAGTTAGCGCCATAGACAGTACAACAACAATGATGAGCAGTTTATTCAACTCAAGTGGTAGGACACCAAGCCTGTTTGCCAACGAAAACACCACAAAACCAAATTCTCCTCCTTGAGAAAGCAGCAATCCTATCCTTACGCTTTCTTGAAGAGTTAGCCCAACTCTTGGGCCTATTGCAGTAATTATCAATGTCTTGATTGCAATAAGGCCTCCCAACAGTGACAGAACATTAGGCCACTCCCGGATGAGAAGCTCCATGTCAATAGAAGTTCCTGTAGTCACAAAGAACAACCCAAGCAGCAAACCTCTGAATGGCCTTATGTCAGCTTCAATTTGGGTACGGAAATTTGTCTCTGCAAGAATGGCCCCAGCCAGAAATGCACCTAATGTATCACTAAATCCCAACCATTGCGTGAGAAGGGATGTTCCTGAAACCGTAAGAAGACAGAGTGCAACAAATGCTTCTGAGCTCCTTGACTCTCGAAGATGCGTCTGATGAGGTATTTCCCTCCAAGGGAAAGTAGGCCAAGTCCACCGAGTGCTTTTAGACTTTCAGCTAATAACATTGGCCACACACTTTGCTCCACCACATTCTTTTGCGTACCTGACTCTCTAGCACAGGGAGTATGACCAAGAGAGGAACAACAGCAATATCCTGCAGGAGGAGGATTCCCAGTGTAGCTGAGCCAAATCTTGTTGGGAGTTCACCTTTCTCAGCAAGAAGCTGAAGGACAAAAGCAGATGAGGATAGTGAGAGGGCAGCCCCAATTACTATTGCTTCATCAACGCTCCTGATATTCACCAGATCAGGTCTTGAATCAAAGAGGAACTGCAAAATCTTGGTTCCAATAGCACCATTAGGAGGAAGCTCGAACGCCGTGAAAGCAAGGGTTGACAAAAGAACCTGAGGCAAACCCATCCCAAAGGCGTATCTGGCAAGAGCCTTAAGGCGAGACAGTGAGAGCTCCAGCCCCATCTCAAACAACAGGAAGAGAATCCCCCACTCGGAGAGGAGCTTGACATCGGTGAGGTTCCTGATGAGGCCGAACTGGTTGAGCACGACGCCGGCGCAGAAGAAGCCAAGAATTGGGCTGGCCTTGACGACGCGGAAGGCCGGGACGACCAGCACGGTGACGCCGAGGAAGGTGAGCGTGTCGAACCCCAGGTCGTTGATCACCTCCACCGCGCTCGCGATGTCCATCCCCGCCGCCGCGCGCACCCGGAGCGCCCTCCTACCCCGCCGCCACCACCTCCTCCTCCCCCTCCCCTCCGCCGACGACGCGGAGGCGCCCCCGATCATCCCCACCCGCAGCAACGCCGACGACGACGCGCCCCCGCACCACCGCCGCACGCACACCGACACCGACACGGGCGCAGAGCGGCTGCTCCCGACGACGACGTGGTGGTGGTGGTGCCGCGGGGCCGCCGCCGCCGCCGCGGCCGCCATGGAGCCAGAGTATGCAAGCCTACTACGTACCTACGTACTAGTGTAGTTGCTGCTGCTTGTTGGCGCGTACGAGGAGAGAGAGAGAGGAGAAGCTGAGGCCGCGAGTAGGCGCGCGCGTAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0137900.1 | 12 | 26302365 | A | G |
| Osa12LNT0137900.1 | 12 | 26301415 | G | A |
| Osa12LNT0137900.1 | 12 | 26302738 | C | A |
| Osa12LNT0137900.1 | 12 | 26303552 | G | A |
| Osa12LNT0137900.1 | 12 | 26304325 | G | A |
| Osa12LNT0137900.1 | 12 | 26304497 | T | C |
| Osa12LNT0137900.1 | 12 | 26305203 | A | T |
| Osa12LNT0137900.1 | 12 | 26305976 | A | G |
| Osa12LNT0137900.1 | 12 | 26303967 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0137900.1 | osa-miR5528 | Translation | 4.0 | 13.179 | 1 | 21 |
| Osa12LNT0137900.1 | osa-miR7694-3p | Translation | 4.5 | 21.354 | 1 | 22 |
| Osa12LNT0137900.1 | osa-miR166k-3p | Cleavage | 5.0 | 17.402 | 1 | 21 |
| Osa12LNT0137900.1 | osa-miR166l-3p | Cleavage | 5.0 | 17.402 | 1 | 21 |
| Osa12LNT0137900.1 | osa-miR167e-3p | Cleavage | 5.0 | 18.551 | 1 | 21 |
| Osa12LNT0137900.1 | osa-miR167i-3p | Cleavage | 5.0 | 18.551 | 1 | 21 |
| Osa12LNT0137900.1 | osa-miR166g-3p | Translation | 5.0 | 17.402 | 1 | 21 |
| Osa12LNT0137900.1 | osa-miR166h-3p | Translation | 5.0 | 17.402 | 1 | 21 |
| Osa12LNT0137900.1 | osa-miR169r-5p | Translation | 4.5 | 20.441 | 1 | 21 |
| Osa12LNT0137900.1 | osa-miR1850.1 | Cleavage | 4.0 | 16.977 | 1 | 21 |
| Osa12LNT0137900.1 | osa-miR1853-3p | Translation | 4.5 | 20.545 | 1 | 22 |
| Osa12LNT0137900.1 | osa-miR1862d | Translation | 4.0 | 18.541 | 1 | 24 |
| Osa12LNT0137900.1 | osa-miR2103 | Translation | 4.0 | 16.669 | 1 | 22 |
| Osa12LNT0137900.1 | osa-miR2866 | Cleavage | 4.5 | 16.511 | 1 | 20 |
| Osa12LNT0137900.1 | osa-miR2926 | Translation | 4.5 | 11.41 | 1 | 20 |
| Osa12LNT0137900.1 | osa-miR3979-5p | Translation | 4.5 | 23.95 | 1 | 20 |
| Osa12LNT0137900.1 | osa-miR5158 | Cleavage | 5.0 | 14.034 | 1 | 24 |
| Osa12LNT0137900.1 | osa-miR5339 | Cleavage | 4.0 | 18.658 | 1 | 21 |
| Osa12LNT0137900.1 | osa-miR5794 | Translation | 5.0 | 24.78 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0137900.1 | 12 | qLEI12 | Resistance or Tolerance | Submergency tolerance | nan | nan |
| Osa12LNT0137900.1 | 12 | qNEI12 | Resistance or Tolerance | Submergency tolerance | nan | nan |
| Osa12LNT0137900.1 | 12 | qTIL12 | Resistance or Tolerance | Submergency tolerance | nan | nan |
| Osa12LNT0137900.1 | 12 | nan | Resistance or Tolerance | Submergency tolerance | R1709 | RM235 |
| Osa12LNT0137900.1 | 12 | qDRS12-1 | Resistance or Tolerance | Drought tolerance | RG181 | RG958 |
| Osa12LNT0137900.1 | 12 | qLEI 4 | Resistance or Tolerance | Submergency tolerance | RM5479 | C901 |
| Osa12LNT0137900.1 | 12 | qSD12 | Physiological trait | Germination/dormancy | RM3331 | RM235 |
| Osa12LNT0137900.1 | 12 | nan | Resistance or Tolerance | Submergency tolerance | RM5479 | RM6953 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)