© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0138300.1
AGAGTAATATGCTTCTTGAACTGTGGGGCTTACCCCCTCTGTATTTGTTTCTAACAAGAGTTGAGTATTGAGGGACCTGAAATCAGTCCCTTGAACTAAAGAAAAACTGTGGCAGGCTTATGGCATACAGGTAGCTGCTTGAATATATACAACAGCCAAGAAATCGTGCGAAATCAAAAGAAAAGAAAATGAAAGAAAAAAAATAATAAGGCATCTGATCTAGTGATTGTTCATGATGCAACTGCCGCTCTTGCATAAGCGACCGGTAAAGACAGCAGCTTCTTTGCCTTGTTTACATACGCGCGCTTGGTGAAGTTGTTGTAGTCGTTTGCTTCGATAGCATCAAGGATCTGCCGGTATAACCACAAAGATGCCAGAACCGGCCATCTACTCGCAGAGTCTAGATGCGCAACGCCCTTCTCCGCCTCATCAAAGAATAACCTGGCACGCAGAATTTGTCCCTTCATGAACTTCCTCCATTTATCAGTCACTTTCCCTCTGAATATGTCTTCTTCTGTCAGACCTGCCTCTGCCAATTCATCCAATGGAAGGTAGATTCTTCCCCTCCTTGAGTCTTCGCCTACGTCTCTGAGAATATTCGTCAGCTGGTTGGCGATCCCAAGAGCTAGCGCAGCGTTGTACACGCTCTCGGTTGAGGCCTTCGAGTCGGGGGCAATCCCCATCACCGGTACTGTCATGAGACCAACCGTGCCAGCAACGTAGTAGCAGTAGAGGTAGAGCTCATCAAAGCTCCTATACCTTGATTTCCACAGGTCAAGCCTCATTCCTTCAATCATGTCTTTGAATGGCTGGATATCTACTGGAAACTTTGACACTGTGTCCGAGAGGGCTGCATCATACATATCATATGGCCTGCCTTCGAAGAGATCTTCTAATCTCTTCTCCCATCGATCAAGTGCCTTTGGTGTAATGTAAGACGAGTTAGGGCCATCTACCAGTTCATCAGTTCTTCTGCACCATACATAGATTGCCCAGACAGCTTTGCGCCTTTCAGGAGTCATAAGCTGAGTACCTGAAATGTAAACGATGGAAACAAAAACCATGAGAAATTACACAAGGTGAAATTCCACTTTACGTAGAAAATCTAAGTATCAACCATACATCAGAGTTTGAGCTAGTCCCCAAAAGGTCCTCATAGCAATAGAAAATGAGTCCCTTACCAGGTCAGGGATGATCCAAGTGGAAACACGGTGATACAGAAAGCAAGATTAAAAAAAACAAGAAGGTTACTGGATTCATCAATCAAGCCCATGCGTCCTCACATCACCCACAAACCCACCACCAACCAGCATATCCCTGACCCTAATTAAGAAGAGAAATCTATAAATTGCCAGTGGTGCACTAGAGAGATCACCATATCTGCGCATCTGCTTGTTGGATCATTTCCTTGGGATGGCATCTATCATCCAAGTGCATTATCTTACCTACTCTGAAGTCGGCAAACATTTGTATATACATGTACAGTTGTTCAGAGCACTGAGAGCCACTCACTCACTCAGGCTGGTGTTGTTTGGCTACTGCTAATATATTTTTGCCATCAGAAGGAGTATTCCATAAATTATACGCAGGAATATTTATCTTCTTAACACGTAATAGGAATCTAGGAATGTTCATAGATTTTTTTTTAATCACCTTTTAACACCACCCTCTTACAATTCCTAGTAAAAGCCAACTAATTGCAGCATTAACTAATCTTTTTAGACCAACAAGTACAAGAAAGTGAAAGTGAGATGTGGCTCCTAGAACCACAAAAAGGGTCGCAAAATTTTATCAAGCCAGCCATTCCACCCAAGAACCCAAAAAGAAATAGAGAAAGGGTAGGTCTACAATTATCATATACAGTACTATGAACAAATCAAGAAAAGGAAGAGACGCTAGCTAAGCTAGGGAGTAGTAGTGGCAAACGAATAGTAGCTAGCTTTCACCTGTGAAATGATAAAGTAATAACGGTGACAAAAACAAAATTGAATGATTAGTCAATGTTGGGTTGGCTGACCTAGGTAGAAGGTCTTGGCGTACTCGGCGCAGACCTCGCCGCAGCGGTGGTAGGCGTCGCCGAGGAGGAGGCCCCAGTCGACGGCGTCCTCCTCCGCCCACCGCGGCGCCCCCGCGCCGCGGCGGTGGGTGGCCTCCTCCACCAGCGCCGCCTGCCGCAGCACGACCTCGTAGACGGCCTCCTCCGCCGCCGTCCTCCTCGACGCCACGGCCACCGGCGCCGTGGCCACCGCCAGGCTCGCGGCCTGCAGCGGCCTCACCGACGAGGCGACGACGACCGGCCTCCTCCCCCTCCGCTGGTGACGCTGGTGGAAGATGGCGTGGATCCTGATGCAGCTGCCGTGGGGGTGGGGCGCCGCCGTCCAGAGCGCCGCCGCCGACGAGGAGGACGCCATCGGGGGCGCGCGGCGATGTGGGGTTGGGGCTCGCTGCGCGGGTCGAATGGTT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0138300.1 | 12 | 26781266 | T | C |
| Osa12LNT0138300.1 | 12 | 26781937 | A | C |
| Osa12LNT0138300.1 | 12 | 26782465 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0138300.1 | osa-miR5540 | Translation | 4.5 | 18.053 | 1 | 21 |
| Osa12LNT0138300.1 | osa-miR169h | Translation | 5.0 | 14.123 | 1 | 21 |
| Osa12LNT0138300.1 | osa-miR169i-5p.1 | Translation | 5.0 | 14.123 | 1 | 21 |
| Osa12LNT0138300.1 | osa-miR169j | Translation | 5.0 | 14.123 | 1 | 21 |
| Osa12LNT0138300.1 | osa-miR169k | Translation | 5.0 | 14.123 | 1 | 21 |
| Osa12LNT0138300.1 | osa-miR169l | Translation | 5.0 | 14.123 | 1 | 21 |
| Osa12LNT0138300.1 | osa-miR169m | Translation | 5.0 | 14.123 | 1 | 21 |
| Osa12LNT0138300.1 | osa-miR171g | Cleavage | 4.5 | 18.533 | 1 | 21 |
| Osa12LNT0138300.1 | osa-miR1442 | Cleavage | 3.5 | 10.602 | 1 | 20 |
| Osa12LNT0138300.1 | osa-miR2105 | Translation | 4.0 | 23.387 | 1 | 20 |
| Osa12LNT0138300.1 | osa-miR5506 | Cleavage | 5.0 | 13.971 | 1 | 21 |
| Osa12LNT0138300.1 | osa-miR1319b | Translation | 5.0 | 13.073 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0138300.1 | 12 | qLEI 4 | Resistance or Tolerance | Submergency tolerance | RM5479 | C901 |
| Osa12LNT0138300.1 | 12 | nan | Physiological trait | Eating quality | RM235 | RM17 |
| Osa12LNT0138300.1 | 12 | qDRS12-1 | Resistance or Tolerance | Drought tolerance | RG181 | RG958 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)