© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0138400.3
GATGAAAAATCACCATCTTATTACTCACTTTTATGCAAAGACCAAACCAGACAATGAGTTCAATTGCCTCGTCCAAGTACAGCGAGTTCAGTACATTTTCTGTTCCCAAAAAAAAAATGATGCCTGAAGTAGCTTGTGCTTCTCATAGTTTTCTTTCTGCAATGTACTACATAGAGGCCTCATTTTGGTTGTAACATATACCCAATCCATGGGTTACATACAAATTCAAACTAGTAGCAGGCAACTCCAATGTAGTGCCGAGTTGTCAAGACCACTTCTTGCTCAATAGTTTCGATATGGTCAAGTCAGTACCACCAAATCCATCCATGACGGCCTTCGCAGAGTGAAACTCAGCTCTGGCGGTTAGGCTGCTTCTAACAACTATGCATGGCATACCAATGCGCTCAGCTGCAAGAACGCCAGATTGGCTACCTGCGACAAGAACACAGTTTTGCACGTCCCGTCCAACATACTCGGATCCAGCGCGTAGAGTGACAATAATCTTCTCGGAGCTTTTAGACGCTGCATTGATATCAACACTAAGTTTCAGAATGGACGCAACTTCTTCTGCTATCCTCTGCTTTTCTGCAGAAGCAGCCTTTTGTGCTTCCTTAACTAGCTGTTCATCCAAACTGGAGGCTACTCCTTCACCAAGAACAAGTTGTCCATATAAGCTTCTTTCAACCTCTTCTTTCCCAACAATATGTATTTTTGATGTTCTCTCTTGGCCTAATTTTTCAATGATATATCTTGAAGTTTTCTCTCCATTTCTCCCGTATGTTGTCAATATGGCGACAGGCACACCCTCATTAAGCGCATCATCAATGAACTGTTCAACTCCAGGCCGCAGTGGTAAGCTATCAGAAGCTGAGAACACTTCCAAAGCTTTCAGCTTTTCACGAAGAACACTTTTCATAAATGATTCTTTCTCGTTAGTTGGCAAAGAAGTAGGCCACCCAATTCTGTTGAAGAATAATAACAACATCCTTTCCTCGTCGCCACTAGCTTTCCTCACTAAATCAGCATATATTGGCTCTGTCCAATTTGCACAATCCAGCCCAAGATTTTGAAATGCTACATTGAAAGCTTGGCGATTGCCGAAGCGATACACATCTGCAAGAACTCCTTCCACTTCGAGGAGCACGGCGATATCCGGCGACGCGGAGCCCTGCGACGACGAGGAGGAGGAGGCGCACCGGAGCGGCGGGATACGGCGGCCGGAGCTCGGGGGAACGGCGGCGCGGAGAGGGAGAGAGGCGGCCGCGGTGGTGGTGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGCAGGGATGGAGGAGGAGAAGGCCTTGGCGACCTCCGGCGGCGAGGCCCGGAGCGGGAGGCAGCGAGCGGCGGCCATGGCGGAGAGGAGAAGGTGCGCGTGAGACAGCAAGAGGCATCCAGCAGTGTATAGCTAATGTCCAATGGTTGTTTTGTTCTACACTCTTCTTAGTCTGTGTTCTTTTGGTGTTGGTCGGGAATTAATCCCCGTTCACGGAAAACGGAGTGATCAATTAGCGTACGATTATTAAGTATTAGCTAAAAATATTTAGAATGGATTAATATAAATTTTAAAGTAACTTTTCTATAGACTTTTTTTAAAAAAAACGTACCATTTAGCAATCTAGGAAGCCTGCAGACGAAAAATGAGGGAAGTGAAGTATGGGAATCATCACAAACGAAATAAGCTTGTTACTCCATCTTTTTTAAAATACTAGTAAGTGTGCACGTGGAATCCACGTTGCTAATAAAATAAATAAAACACATAATATAATTGTTCAAGTGCTAAATAATTTTCAGATTTCATTTTTTGTTTCAAGATCGATTAACGATCAGTGAGGCGGTCAGACCCTAGCTTCATATAATCACACAGAACCAAAATTTGAGGGAGTCCCATCTACCTTTTGTTACAGTAATAACGTTTTCAAAGAGTACCACACCAAGGAAATTATTTAACTTGTTGACGTAGTGCCTGTCTTGCAAGACACGGATTGTTCCCTTTTGTTGCTTTCAGATCTCATAAGCTGATGTTTTACTGTACCTTGACCTGGACAGCATGTGCCTCACTCGCACGCATCAATGAAACCAGATGAGACAAGTCTTCAGCAACTGGGTTGGAGGGGACTGCTACCTCATGCGTGACCTGGTTGTATCATTGACGACCAGCTAAGAGACGGGACATCCAATGGAGATCACTGTTGCTGGTGTTGCTGGTGTCCTTATTTGCTAGCATGAATGATGTCCAACGGCCCTAGTCCTGTGCCCTCGTTCCAGCGCATCCCTCCAGTCGGCACCCTCTCCTACGACCGCGCCGGCGGCCTGCTCCTCCCCGGCACCTCTGTTGGCGCTCGCCTCTTGCCCAGCCAACCTCGCCGATGCTGACGGGCCATGCGCAGCGACCTCCAGCCCTCCTCCAATGGCCCCCTCTCCTCCTAGCAAGACTCTCCGCCACCTCATATCCCCTTTCCGGCGGGCGGCACCCGGATGTCCGGCCCGCGCGCCGGCGCGCGCGAGGAGTCAGCGGGGTAGGGGGAGCAGAAGTGCAGAACCCGCCTCTCTTTCCTCTCCATCGCGGCGCGGCGCGGCGCGAGCAGGGAAGCAGGCAGCGGCGGGTAGGGTGAGGCGGCTCCGGCGGGTGCGCGCGAGGAGGAGGCGAGCAGCTCCGGCGGGAGGCGGCGGCAGCGGGCTGGCGCGCTCTAGGAGGAGTCGAGCGGCTCCGGCGGGAGAAGGCGGCGGCGCGCTGGAGCACAAAAGGGAGCGTTCCCTTTCTTTTTTCTTTGACC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0138400.3 | 12 | 26998086 | T | C |
| Osa12LNT0138400.3 | 12 | 26998242 | G | T |
| Osa12LNT0138400.3 | 12 | 26999238 | G | A |
| Osa12LNT0138400.3 | 12 | 26999686 | C | T |
| Osa12LNT0138400.3 | 12 | 26999868 | A | G |
| Osa12LNT0138400.3 | 12 | 26999906 | T | G |
| Osa12LNT0138400.3 | 12 | 27001274 | G | T |
| Osa12LNT0138400.3 | 12 | 27001826 | T | A |
| Osa12LNT0138400.3 | 12 | 26998229 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0138400.3 | osa-miR5817 | Cleavage | 3.0 | 17.1 | 1 | 24 |
| Osa12LNT0138400.3 | osa-miR1861o | Cleavage | 3.0 | 14.662 | 1 | 22 |
| Osa12LNT0138400.3 | osa-miR417 | Cleavage | 4.0 | 15.774 | 1 | 21 |
| Osa12LNT0138400.3 | osa-miR1850.1 | Cleavage | 4.0 | 15.582 | 1 | 21 |
| Osa12LNT0138400.3 | osa-miR1861a | Cleavage | 3.0 | 14.662 | 1 | 22 |
| Osa12LNT0138400.3 | osa-miR1861b | Cleavage | 3.0 | 14.662 | 1 | 22 |
| Osa12LNT0138400.3 | osa-miR1861c | Translation | 3.0 | 14.662 | 1 | 22 |
| Osa12LNT0138400.3 | osa-miR1861d | Cleavage | 4.0 | 14.662 | 1 | 22 |
| Osa12LNT0138400.3 | osa-miR1861e | Translation | 4.0 | 14.662 | 1 | 22 |
| Osa12LNT0138400.3 | osa-miR1861f | Cleavage | 3.0 | 14.662 | 1 | 22 |
| Osa12LNT0138400.3 | osa-miR1861h | Cleavage | 3.5 | 14.662 | 1 | 22 |
| Osa12LNT0138400.3 | osa-miR1861i | Cleavage | 3.0 | 14.662 | 1 | 22 |
| Osa12LNT0138400.3 | osa-miR1861j | Cleavage | 3.5 | 14.662 | 1 | 22 |
| Osa12LNT0138400.3 | osa-miR1861k | Translation | 4.0 | 14.662 | 1 | 22 |
| Osa12LNT0138400.3 | osa-miR1861l | Cleavage | 3.0 | 14.662 | 1 | 22 |
| Osa12LNT0138400.3 | osa-miR1861m | Translation | 4.0 | 14.662 | 1 | 22 |
| Osa12LNT0138400.3 | osa-miR1861n | Translation | 4.5 | 14.662 | 1 | 22 |
| Osa12LNT0138400.3 | osa-miR2103 | Cleavage | 3.0 | 24.806 | 1 | 22 |
| Osa12LNT0138400.3 | osa-miR2864.1 | Cleavage | 4.5 | 13.545 | 1 | 21 |
| Osa12LNT0138400.3 | osa-miR2920 | Translation | 5.0 | 20.159 | 1 | 23 |
| Osa12LNT0138400.3 | osa-miR2931 | Cleavage | 4.5 | 16.114 | 1 | 20 |
| Osa12LNT0138400.3 | osa-miR5508 | Cleavage | 4.0 | 17.261 | 1 | 21 |
| Osa12LNT0138400.3 | osa-miR5513 | Translation | 4.5 | 18.887 | 1 | 21 |
| Osa12LNT0138400.3 | osa-miR5513 | Translation | 5.0 | 14.243 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0138400.3 | 12 | qLEI 4 | Resistance or Tolerance | Submergency tolerance | RM5479 | C901 |
| Osa12LNT0138400.3 | 12 | nan | Physiological trait | Eating quality | RM235 | RM17 |
| Osa12LNT0138400.3 | 12 | qDRS12-1 | Resistance or Tolerance | Drought tolerance | RG181 | RG958 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)