© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0138600.1
GAAGAGAACAAATGCAAAATATCTTCATACTGGGAAATAGGGTCAGGTGGCAAAGAATGTTCCCCTCTCTAAACTAGAAAGTCGGCCAATTAATTCAGAAAATGTGCCTCTCCTCAAGAAATGTTTGTCCATTTCCTTAATATGTGAGCTCACATGGCACAGGTGTTTATACCTGATGTCTGATGAGGTGCTTTTCATTCTGATGGAATTCGGTTGCTTTTGCAGTGCAGTGCTTGAACGAGACCCAGCCTGGTGTCAATCACCGTTTCCATGTTTCCTCGGGTCACCATCTATTTTGTCCTGAGATCTTCCAAAACAACGGAGGCAGCGTTACGGCCCGGAGCGCCCATTACCCCACCTCCTGGGTGTGCACCACTGCCACAGAGGTACAATCCCTTCACTGGAGTTCTGTAATCTGACCATCCCTTGGCAGGCCTCATGAGGAAAAGTGAATCCAAGCCCATTGCGCCATGAAAGATGTTACCACCTGTTAGGCCAAACTCCCTTTCAAGATCAGGTGGAGTCAGCATATCATAGCCTACCACTGATGAGCTAAAACCCGGTGCATATTCATCAATCAAGGAAAAGCATCTTTCAGCAAAGGATTTTCTAACATTAGAATCCTGCCAGCTGCCTTCTGAAAGTTTGTATGGTGTGTACTGAACAAAAAGGTTAATAACATGCTGGCCTGGTGGGGAGATGGTCTTATCCAACACAGAAGGAATCGTCATTTCTATAACAGGTCTTGTGGATGAGACGCCATTTGCAGCTTCCCTGTACGCTAGATCGATTTCCTCCATGCTTTCAGATCCAATGTGTATGGTGCCCATGTGTTCTGGACCGCCTTCAGGATTAAAGTCTTTGCAACAGGAAAACTGTGGCAGCCTGTCAACAGCCACATTAATTTTCGTTGTTGCAGAGCTATAATCTGCAGTTTTGATAGCAGAGAGGAAGTTGTCTGGAAGAACATTGGCAGGCACTAGGTCCACAAATGTTCTATATGGAGTTGCATTTGATAAAACAACTGATGTCAGCACCTCTGTTCCATCAGCCAAAACTACCCCCTGTACCTTCCCAGAAGTGTGATGAACAGATATCTGGGAAACCTCTGCATTTGTTAAAATTTCCACACCTGCTTCAAGAGCTGCTTTGCTTATAGCTGACGATACTGAACCCATACCACCTTCAACATACGCCCATACTCCACGTTGGCCACCAGTTTCCCCCATAACATGATGCAGAAGAACATAACCAGATCCTGGAGTGTGGACACCAGCCTGTAGAAAGTCCATGCAGCATCAAATGCTAAACCATTACCATTGGCCACAACACATTTCTTGGTTCATCCAAAGCACCCTTACCATAGAACCTATCACAGCATCAGTCGCAAGAGTTGCCTTCAACACATCACCCTCAAACCAGTTGTTCAAGATCTTGGATGCTGGTGAAAGGAGAAGGTCAAAGAAATCCACCATGTCCTTCTGCCCCTGCTGCATCACAATCCCAAGAAGTTTGCTCCAGAACACAGACTTGTCAACCTTATCCTTCATCCTGTCCACCATGGAGAGGTGGTATTCATGCCTCATCTCAGGGGGAGGCGAGTCTATGACAAAGTCCATGAGTTTGCAGAACTTCTCCAGCTTCTCCTCGTACCTCGGGTATGCACCGGCATCATTCTCGGAGAACTTGCTGATCTCCGAGTGGTTCAGCTCAGCGTCGGGGCCGAGAAGGAGATACCTGCCGTCTAGGCATGGCGTGAATGACGACGGGCTCCGCGGCAAGAGCTTCAGCCCATGCCTCTCCAGCTCCAGCTCCTGGATCAGGGCGGGGCGGAGGAGGCTGAGGAGGTAGCTGCAGCGGGAGAAGCGGAAGCCCGGGACGAGGTCGGACTCGGAGACGGCGGCGCCGCCGATGACGCCACGGCGCTCGAGCACGGCGACGGAGCGGCCGGCGCGGGCGAGGTAGGCGGCGGCGGCGAGCCCGTTGTGGCCGCCGCCGATCACCACCGCGTCCCACCGCTTCCCCTTGGGGAGGAGCTGCTGCTGCGGAGTCGACGACGGGGCCTCCGTCGAGAAGCGGCGGCGTTGACGGCGGGCGGCCGATAGCAGGAGGCTCCTCGCCGCCGGCGACATTGGGTTTAGGGGTTCAGCCGCCGCCGCCGCCTGCAGCCGGTGGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0138600.1 | 12 | 27052913 | A | G |
| Osa12LNT0138600.1 | 12 | 27055152 | T | A |
| Osa12LNT0138600.1 | 12 | 27056237 | T | G |
| Osa12LNT0138600.1 | 12 | 27056531 | C | A |
| Osa12LNT0138600.1 | 12 | 27056853 | A | G |
| Osa12LNT0138600.1 | 12 | 27052325 | A | C |
| Osa12LNT0138600.1 | 12 | 27052626 | C | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0138600.1 | osa-miR5541 | Cleavage | 4.0 | 15.935 | 1 | 21 |
| Osa12LNT0138600.1 | osa-miR395b | Translation | 4.5 | 14.588 | 1 | 21 |
| Osa12LNT0138600.1 | osa-miR395d | Translation | 4.5 | 14.588 | 1 | 21 |
| Osa12LNT0138600.1 | osa-miR395e | Translation | 4.5 | 14.588 | 1 | 21 |
| Osa12LNT0138600.1 | osa-miR395g | Translation | 4.5 | 14.588 | 1 | 21 |
| Osa12LNT0138600.1 | osa-miR395h | Translation | 4.5 | 14.588 | 1 | 21 |
| Osa12LNT0138600.1 | osa-miR395i | Translation | 4.5 | 14.588 | 1 | 21 |
| Osa12LNT0138600.1 | osa-miR395j | Translation | 4.5 | 14.588 | 1 | 21 |
| Osa12LNT0138600.1 | osa-miR395k | Translation | 4.5 | 14.588 | 1 | 21 |
| Osa12LNT0138600.1 | osa-miR395l | Translation | 4.5 | 14.588 | 1 | 21 |
| Osa12LNT0138600.1 | osa-miR395s | Translation | 4.5 | 14.588 | 1 | 21 |
| Osa12LNT0138600.1 | osa-miR395t | Translation | 4.5 | 14.588 | 1 | 21 |
| Osa12LNT0138600.1 | osa-miR395m | Translation | 4.5 | 14.588 | 1 | 21 |
| Osa12LNT0138600.1 | osa-miR395n | Translation | 4.5 | 14.588 | 1 | 21 |
| Osa12LNT0138600.1 | osa-miR395p | Translation | 4.5 | 14.588 | 1 | 21 |
| Osa12LNT0138600.1 | osa-miR395q | Translation | 4.5 | 14.588 | 1 | 21 |
| Osa12LNT0138600.1 | osa-miR395r | Translation | 4.5 | 14.588 | 1 | 21 |
| Osa12LNT0138600.1 | osa-miR1428a-5p | Cleavage | 5.0 | 19.644 | 1 | 21 |
| Osa12LNT0138600.1 | osa-miR1428a-5p | Translation | 5.0 | 17.887 | 1 | 21 |
| Osa12LNT0138600.1 | osa-miR1441 | Translation | 4.5 | 17.496 | 1 | 21 |
| Osa12LNT0138600.1 | osa-miR2106 | Cleavage | 5.0 | 19.3 | 1 | 21 |
| Osa12LNT0138600.1 | osa-miR2118o | Cleavage | 4.5 | 17.809 | 1 | 22 |
| Osa12LNT0138600.1 | osa-miR395y | Translation | 4.5 | 14.588 | 1 | 21 |
| Osa12LNT0138600.1 | osa-miR5158 | Cleavage | 5.0 | 14.087 | 1 | 24 |
| Osa12LNT0138600.1 | osa-miR5523 | Translation | 4.0 | 12.759 | 1 | 22 |
| Osa12LNT0138600.1 | osa-miR1850.3 | Translation | 5.0 | 16.466 | 1 | 22 |
| Osa12LNT0138600.1 | osa-miR5078 | Translation | 5.0 | 19.179 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0138600.1 | 12 | qLEI 4 | Resistance or Tolerance | Submergency tolerance | RM5479 | C901 |
| Osa12LNT0138600.1 | 12 | nan | Physiological trait | Eating quality | RM235 | RM17 |
| Osa12LNT0138600.1 | 12 | qDRS12-1 | Resistance or Tolerance | Drought tolerance | RG181 | RG958 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)