>Osa12LNT0138800.1

GCTCCACGCTTTTCCAAGTTTATAAATGGTGCTTTTCTTAAACGACTTTTTAACTATTTAGAAGTTAATTCATTTGTTTATAATCTCAAATAGCTATCACATAAATCAGATAATTCATCAATTTCTGTTGTCCTAAACCCTAAGTAGTACATATTTTTTTCGTGCGAATCATGGTGATCAACGAATAATCAAAGTGGTAACATGAATCTTAAGAGCTACTATGAACAATTGCAAATATGTGTCAAAATTATTTGCTATTAATTAGACATCTAATGGTTTGCTAGCAACATATTTAATTTCTCTCTACATGTATATAAACATGGACAAAGCTAGAATGAATATTAACATATATCCCATACATATATATTACATGTTAATATTCTCATTACATGTGGTAAGTCCATTAAAATTTCAAATACCCTCAAGCTACCACTTGGTGCTCTAATAAATTAGAGAACATATTAGAAATTCTAAGAAAAAAAGCAAATTATCTATTACTTGATTTTCACTTAAATCGGTGGGTTCAATATTATAAACCATTAGATTAAATTGATCTTAGAAGAAACTAAATACTACAAGGTCCCACCTCTCCACCTTCGATACGCACCTACGTACGCGTGGGTACCTATGCTTCCCCTCCCTTTTATCATTTTTCCCTTTCTTCTTTTCTTCATGTATACGCTTCCCTCTCTTTCTTACTATATCATGCGCCTTCATGAGACGATTTAATCACAAGAATTTTGAGTATCTTGCTCTCACATTTTTAATTTGTAGCCATACTACAAGCAATATATAGTTTATTATTTACTCGAGAAAATAACATGATTCAAAAGTCGTAAGTACTTAATCCATCTCCTACTTAAAAATTTGTGAATGGATTTTTAAGATACTTTAAGAAAAATAGAAACCTTAAATTATTATAAAATTACATTATCCGAACTTTAGTTTTCCCTTAATCTATGAGAC

Explanation	CPC Score
noncoding	-1.35766

Transcript ID	Chromosome	Locus	Ref	Alt

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa12LNT0138800.1	osa-miR2275a	Translation	3.5	10.73	1	22
Osa12LNT0138800.1	osa-miR2275b	Translation	3.5	10.73	1	22
Osa12LNT0138800.1	osa-miR2878-3p	Cleavage	5.0	9.728	1	24
Osa12LNT0138800.1	osa-miR2919	Cleavage	4.0	4.617	1	19
Osa12LNT0138800.1	osa-miR2919	Cleavage	4.5	13.923	1	19

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa12LNT0138800.1	12	qDRS12-1	Resistance or Tolerance	Drought tolerance	RG181	RG958
Osa12LNT0138800.1	12	qLEI 4	Resistance or Tolerance	Submergency tolerance	RM5479	C901

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus