© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0139000.1
CTCTACCCAAAATGTTGTACATTAATTTCTCTACCCACTTAAATCGATTGTGTATTTCTATATACTCCCTCCGTTTCGAAATGTTTGACGCCGTTGACTTTTTATCATATGTTTGACCGTTCGTCTTATTCAAAAAATTTAAGTAATTATTAATTCTTTTCCTATCATTTGATTCATTGTTAAATATATTTTTATATAGGCATATAATTTTACATATCTTATAAAAGTTTTTGAATAAGACGAATGGTCAAACATGTGCTAAAAAGTCAACGGTGTCAAACATTTCGAAACGGAGGGAGTATGTTTTTGCAACATGCATGGGGTCAATTCTAGCTATAAATGGACAACGTATATCGCGGAGGACAATTCTTTAAATGGACAATTTTCTCTAACTTGATCTCATCCAGTACCATTCCCATCGCCCGTTCACAACGGACCACGGCGAGCCACCCGCGAGCACCACAAGTCCATGCGCGCGCCACGCCACCAACGCCGGCCGCCGTGAGCAAGTTCCACCGCCGCTTGGTCTCCTCTCTGCTTCTCACCTTCCGACTTGGGTTGCGACGTTGATCATCGATCAGCAGCGCTGGAGGGCTGACGGAAGGTGAGCATGCTGGGAGAATCGACTCTGACAATCACCTCTTCCCCGGCCGACTCATCGCTCGAGTTGTCCTCGTCCTCTTCTATTGCCTTGCGTTGTCGCCGCCGCCGCCGTCCTGCCTCCTCCGGCTCCGGCGGCAGAGAAGCACCAGCAGCAGCAGCCTGCCTTGCCGTCGTCATGTTGGCACCCTCGGACTGCACAGACAGCAGGGGCCTCTGCGTGTTGGACGACCTCGAAGGCACTCTTGGGTACGACGAGCTGTGCGCTTTATTAGAGCTTGCTTTCGTGTGACGATGCCTCTGCCTCCTCTGACCCTGACCCTGACCGGACTTCATGTCATTGATCATGCTCCCGTACATGCTCAGCTGCAATGCTCTTGCAGAGAAGCTTGCTGGATGGTCTCTGATTTCAGTTAAGCTGGCACCATTCTGAGCTCCCCTGGATTTTCTGAAGCTTTCCGGCCAGCTGAGCAAACCGCTGTGCTCCTTGCTTTGTGTCCGAGGCAGTTCAAGGGTTTGAGATATCAATGACGCACTCCTTTGCAGATCCGCCTCTATTTCGGGCCTCCCTATCTCAACGAACAAAATCCTTGCTCTAGCCTCCACCTGATAGCTGGGTGCTGTATAACAGTAGTCAATGCGGTTTATAGCTGATGACTCGAGACCAAATAAGTTCAAGTCGGCATTTGGTGGTAGCAGTAACCCTGGAGGTGTGATCAAAGTTTGGTTCTTGGTCTTCAAAAATCCTTCCAGTAAGATGCCAATGAAATTCTGCTCAAGTTCAATTTCTTCGCCCTTAATGTAGATGTTCATAGTAGATCTTTCAGTGATGAGAACCCTGAGCTCATGTGTTGCCATTTTCTCAAACATCATAGGGAGCAAAAGCCTGGCAACGACTAGAGCACTTTCCTGCCACAGAAAAATCTCAATAGAAGGATCTGATTGACGCAATTGCTCTATCTTTTCAGCTTCAATGAAGAAGCAGTGCACCACAGAATCTGTAATCATGTCACAGATATAAGGTTTTCCAATCAGCACCTCATACAGGCCCAAAGTGCTGCCATGTGATAAAATTGGATCCAATGAATGCCTGCTGCTTAATCTCTGACTTGTCCACTTTACTACTCCAATCGAAACAAGCCATATACCAGTTGGCCTTGAGCCCTCTCTATAAAGGATTGTGCCATGTCCTTTTACTGTTTCTTTTGTGCTACTTAATAAAGGATCACGCATCGCAGCAGGCAGTGCACCAACTAACGGATGAGTGTTCAAAAGATCACTGACTCTTGGCATTTTTACCAATGGTGGATTCCTCTTGAACTTCTTCAAGTCTGTCTGCAAAGCATCATCTAGATGGGCCATTTCCTTTTCTTCCAGCAACCCAGTCTTCTGGAGATTTTGAATATACTCACTCAAGTGGGTCAATACCGAATATGTTACTTGTCGAGTCTTCAGCACACGAAGCACCTGAGGGAATGTAACACGAACATCTTCCAAGAATTTTCTAGCCTCCTCTCCCTCAGCATTACTTTCATCAATAACAATTCTGGCAACCTCACTATCACCAAGAAAGTCATGTAGCTGCCGTCTTGCGATTCTATGAGCACGGAGAAATGCAGCACAGATGTAACATCCTGACTCCAGTCTTTCTACTGTGAAGTAAGTGATAAGCCTTCGTGGCAACCTGCTCATTTGAAGGAACCTATAGTAATTTGGAAAATGGACATTGGACCGCAAACCCTTCCAGTCACATAATTCTTGGGTAGGAACAAGATCCATAGCTTCATCAACCGATCTCATTAAAATATTTGCAGTGGTTTGAGTTATTCGTCCTTCTTCAAGCATTCCCCAGTAAGCAGCTTGGACACCATTTAGAAGCCGCACACGGATGTCCCTTAAGTTCATGGTATGCATGCGATCATTTCTGTCAGAAACAGCATGAGGATGCACAGGCTCATCGTCCAAGTCGTTCAAGCATGTGATATATTTCTTTACAGTAACCCAATCAGCAGGAGGACCAAGTTCCTCATCATCCCTAAGATCACCAAAAGCCTCCAATGCCTTGTTTAGCATTTCATATTTTGTATAATTCAATATGCGAAGCTTTGTTGCTGCTAATCTGTCCATTCCAAGTAGATGCAACAAAAATTGTGTAGTAGAACCATTAAAAATCAATGTCAAAAACACGATGCCACCAGTGAAGAACACAAACATTGTTCCGTCAACTGGTTTCAGATGGGTCTGAACTGCATCACTAGCACGCTTAACAGATAATGATAGAGACAGAGCAACAGCCCCTCGCAGTCCCGCCCAAACAAGAATTGTGGCTTCTTTCAAGTCCAAACCATACCCAAAGTGGCGCAACAATGGATACAAAATAACAACAACTAATATCCGAGAAATTTGCACAAATACATAGAGCAGAAGAAGGAAGCCCCATGAAGCACCGTGCCTCTCGAAATGGACATTATTTTCTAGTACTCCATCTGCAATAACAACCCCACTCAGTATAAATATAAGTGTGTTTGCTATATAAGCAACCATTTCCCAGAAATGATGCAAGCTTTGCTGACTGTCACCCTTAAAAGCAGTTTTTGCAAAAGCGGCATAGAACATTCCCAGTGTCATGACGGTCAAAACACCAGAGACCTCCAGTGCATCTTGTGCAGTGAAGAAAGCAATGTAGCTGACAGCAAGAGTAAGCGCGATCTCTATGATTGTATCATTAAAAATAAAGCCCAGCCACAGTACTGATGCAATTCCAAAAGCAAGGCCCAGAGCAACAGCTCCAAGTGAAACTTCTGACAAGAATTTTATTATTGATCCTGCATCGAAAGTTCTTCCAAGCACCATCCTATAGAATAACTGATACACAACAATAGCAGTCCCATCATTCATTAAGGATTCTCCCTCAATTATGGTACTAAGCTTTTTACTTGCGCCAAGTTCTTTTAGCAGTGCAACAACAGCAACGGGGTCAGTTGCACTAAGCAATCCACCAAGCAACAATGATGTTTTCCAGTTCCAGTTGTATGGAAAAGTGAGCTTTAGAGCAGAGCCTAGGAAAAAGGTTGATATTAGCACACCAGGTCCAGCAAGTAACACCATTTGTGCCATACATTTCTTGATTTGGTGTATTTCCATGGAAAAGGAACTTTCAAAAAGAAGAGCGGGTAGAAAAACAGCCAGAAGAAGATCAGGATTAATGTTAGCCCAGATACGAATGCCGGCTCCGAGTTTGCCCATGCCATGTTTTGTGCCAAATTCGAGCGATCCGAGGGCGACGCCGAGGACGAGGAGGGCGACGGTGTAGGGGACGCGGGTGCCCCGGAGGAGGTGGCGGGAGGCGATGCCGAGGACGAGGGAGACCCCGACGAAGAGCACCGCGTCATCAGGCTCCGCCTCGGGATTGTCCATGGATT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0139000.1 | 12 | 27495030 | T | C |
| Osa12LNT0139000.1 | 12 | 27497172 | C | T |
| Osa12LNT0139000.1 | 12 | 27495133 | T | C |
| Osa12LNT0139000.1 | 12 | 27495150 | T | C |
| Osa12LNT0139000.1 | 12 | 27495196 | A | G |
| Osa12LNT0139000.1 | 12 | 27495273 | A | G |
| Osa12LNT0139000.1 | 12 | 27495519 | T | C |
| Osa12LNT0139000.1 | 12 | 27497741 | T | C |
| Osa12LNT0139000.1 | 12 | 27498547 | C | T |
| Osa12LNT0139000.1 | 12 | 27499135 | T | C |
| Osa12LNT0139000.1 | 12 | 27500328 | A | C |
| Osa12LNT0139000.1 | 12 | 27500361 | A | G |
| Osa12LNT0139000.1 | 12 | 27501093 | T | C |
| Osa12LNT0139000.1 | 12 | 27506048 | T | A |
| Osa12LNT0139000.1 | 12 | 27506874 | T | C |
| Osa12LNT0139000.1 | 12 | 27507230 | T | A |
| Osa12LNT0139000.1 | 12 | 27507949 | A | G |
| Osa12LNT0139000.1 | 12 | 27497344 | T | A |
| Osa12LNT0139000.1 | 12 | 27504424 | T | A |
| Osa12LNT0139000.1 | 12 | 27504825 | T | C |
| Osa12LNT0139000.1 | 12 | 27505802 | G | A |
| Osa12LNT0139000.1 | 12 | 27502348 | C | T |
| Osa12LNT0139000.1 | 12 | 27502371 | T | C |
| Osa12LNT0139000.1 | 12 | 27503721 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0139000.1 | osa-miR812s | Translation | 4.5 | 17.827 | 1 | 24 |
| Osa12LNT0139000.1 | osa-miR812s | Translation | 3.0 | 8.517 | 1 | 24 |
| Osa12LNT0139000.1 | osa-miR5799 | Translation | 4.0 | 17.827 | 1 | 24 |
| Osa12LNT0139000.1 | osa-miR5799 | Translation | 3.0 | 8.517 | 1 | 24 |
| Osa12LNT0139000.1 | osa-miR5824 | Cleavage | 4.0 | 10.717 | 1 | 24 |
| Osa12LNT0139000.1 | osa-miR5512b | Translation | 4.0 | 10.176 | 1 | 21 |
| Osa12LNT0139000.1 | osa-miR162a | Cleavage | 4.5 | 16.843 | 1 | 21 |
| Osa12LNT0139000.1 | osa-miR395f | Cleavage | 4.5 | 15.508 | 1 | 21 |
| Osa12LNT0139000.1 | osa-miR156l-5p | Cleavage | 5.0 | 16.338 | 1 | 21 |
| Osa12LNT0139000.1 | osa-miR162b | Cleavage | 3.5 | 16.843 | 1 | 21 |
| Osa12LNT0139000.1 | osa-miR437 | Cleavage | 3.5 | 14.164 | 1 | 21 |
| Osa12LNT0139000.1 | osa-miR812a | Cleavage | 3.5 | 9.838 | 1 | 22 |
| Osa12LNT0139000.1 | osa-miR812b | Cleavage | 3.5 | 9.838 | 1 | 22 |
| Osa12LNT0139000.1 | osa-miR812c | Cleavage | 3.5 | 9.838 | 1 | 22 |
| Osa12LNT0139000.1 | osa-miR812d | Cleavage | 3.5 | 9.838 | 1 | 22 |
| Osa12LNT0139000.1 | osa-miR812e | Cleavage | 3.5 | 9.838 | 1 | 22 |
| Osa12LNT0139000.1 | osa-miR814a | Cleavage | 4.5 | 17.251 | 1 | 22 |
| Osa12LNT0139000.1 | osa-miR814b | Cleavage | 4.5 | 17.251 | 1 | 22 |
| Osa12LNT0139000.1 | osa-miR814c | Cleavage | 4.5 | 17.251 | 1 | 22 |
| Osa12LNT0139000.1 | osa-miR529b | Translation | 4.0 | 21.371 | 1 | 21 |
| Osa12LNT0139000.1 | osa-miR169r-5p | Cleavage | 5.0 | 15.937 | 1 | 21 |
| Osa12LNT0139000.1 | osa-miR1436 | Cleavage | 3.0 | 12.387 | 1 | 21 |
| Osa12LNT0139000.1 | osa-miR1436 | Translation | 5.0 | 11.855 | 1 | 21 |
| Osa12LNT0139000.1 | osa-miR1439 | Cleavage | 2.0 | 10.79 | 1 | 21 |
| Osa12LNT0139000.1 | osa-miR1439 | Translation | 4.5 | 12.346 | 1 | 21 |
| Osa12LNT0139000.1 | osa-miR1882a | Cleavage | 4.0 | 21.254 | 1 | 24 |
| Osa12LNT0139000.1 | osa-miR1882b | Cleavage | 4.0 | 21.254 | 1 | 24 |
| Osa12LNT0139000.1 | osa-miR1882c | Cleavage | 4.0 | 21.254 | 1 | 24 |
| Osa12LNT0139000.1 | osa-miR1882d | Cleavage | 4.0 | 21.254 | 1 | 24 |
| Osa12LNT0139000.1 | osa-miR1882e-5p | Cleavage | 4.0 | 21.254 | 1 | 24 |
| Osa12LNT0139000.1 | osa-miR1882f | Cleavage | 4.0 | 21.254 | 1 | 24 |
| Osa12LNT0139000.1 | osa-miR1882g | Cleavage | 4.0 | 21.254 | 1 | 24 |
| Osa12LNT0139000.1 | osa-miR1882h | Cleavage | 4.0 | 21.254 | 1 | 24 |
| Osa12LNT0139000.1 | osa-miR1320-5p | Cleavage | 4.0 | 12.435 | 1 | 21 |
| Osa12LNT0139000.1 | osa-miR2863b | Cleavage | 5.0 | 15.392 | 1 | 21 |
| Osa12LNT0139000.1 | osa-miR2874 | Translation | 4.5 | 10.274 | 1 | 24 |
| Osa12LNT0139000.1 | osa-miR2922 | Cleavage | 4.5 | 7.415 | 1 | 20 |
| Osa12LNT0139000.1 | osa-miR2923 | Cleavage | 5.0 | 9.443 | 1 | 22 |
| Osa12LNT0139000.1 | osa-miR812o-3p | Cleavage | 4.0 | 10.103 | 1 | 24 |
| Osa12LNT0139000.1 | osa-miR5161 | Translation | 5.0 | 11.408 | 1 | 20 |
| Osa12LNT0139000.1 | osa-miR5512a | Translation | 4.0 | 10.176 | 1 | 21 |
| Osa12LNT0139000.1 | osa-miR2097-5p | Translation | 5.0 | 21.121 | 1 | 22 |
| Osa12LNT0139000.1 | osa-miR5144-5p | Cleavage | 5.0 | 15.687 | 1 | 21 |
| Osa12LNT0139000.1 | osa-miR5518 | Cleavage | 5.0 | 10.188 | 1 | 21 |
| Osa12LNT0139000.1 | osa-miR1881 | Cleavage | 3.5 | 15.878 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0139000.1 | 12 | qDRS12-1 | Resistance or Tolerance | Drought tolerance | RG181 | RG958 |
| Osa12LNT0139000.1 | 12 | qLEI 4 | Resistance or Tolerance | Submergency tolerance | RM5479 | C901 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)