© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0139100.2
TTTTCTCGAGTGAACCAACTCCTGCAACTTTTATTCACTAGTATCTCTACAAATGACCAACATCCAATGTACAACAGCATAAGATCATCCAATGTACGACAGCATATGATGATCCGGCATGAAAAAGGCAAAAATAGCTCATGGAGAAAGCAAGCATTATCCCCTTCTTGATTCGGAGATAATATACAATTCCCCCATGCACTGCATAGCGTTCCGAGTGCCTCTTATGAGTCGAATTGCAAAGAATGGCCGACAATTTATATGTAGCAATATTCTTATCGGTGACCTCTCCTCCTTGATGCAATGCGGGCTCGTGGAAGGCCCAGAATAGCCACCAGCCCACCGATAAAAGATGCAGCAGCAGCCACTGCAAAGGCTGGTGCATTGCCACCACCAAACAGTTGGTCCCAGGGCCCGCTACCCAGTGACACAATAACCTGTGGTATGACAATAGCCAAATTAAGAATGCCCATTGCTAGACCTTGGCCAAGTCCCAGATTTTCAACCCGACTAGCAGCCATTGCATATGGTATACTGTACGTGATCGCCAGGGGCGCTCCTAAAATTGTAAAAACTACCAGGGAAGCAATGACAATGCCGGTTGGTGGTACTCCACTAGGTGGATAATCCATATTCTTTGCCACATATGTTATTACAAGCATTGCCACAAAGCACAATGCCATTAGGATATTGGAGACACCCCACACCAGTCCAGCTCCCCACTTCCGACATAACTTCTCTAGTACAATAGAAGTGAATCCAAGAAGGACCGAGTTCAGCATCAGACCAAAAGAACCCATTCTCACACCATCATGATAGCTCTGAGTTATACTTGGATCATCTGGACTTCCACGATAGATCTCTCGACCCATCCAATCGGTATCAAAGAGGATAAATGGAAACCATCCAATCCATGTGAGGGCAGTAACAATCAAAACCATCCAAACCGGTAATGTAAAGTACCGGAATGATCCAAAAAGTTCCCAGAGGAAAGCTTCCTGTTCTGTGCTAGGGTGATCTGCTTCATCACTTCCAAAGGATTGAGGCTCTTGCACTGATGCTACAGTGATGCATGTAGTGACCACCAAAATGATAATATCAAGTAGAAAGGCAGACTTGAGGTTGGCACAGCTGATGCTACATGATGGAGTAACGGTGAACGGGAATATCTTGTACCAGCCACTGTATGCTCCAGTGGCATATCCAAGTATGTTTCCCAGGGCCATGAACAATGAGAAGTAAGCATTAGCTATCCGAGTCCTCCTTGGGTCATTCTCACACACATGAAGACTCCAAACAAAGTGGATTCATGCTTCTCTATACTTCGTCAGGTCGAAGGTTAGGGTTCTCGAGCAACATCGTTCTGAGTCCCTATAAACACCAACCAGCGCTTCAGCTTTGTCATAGAAACTGTCCTTCAGCGATATAACGATGCTCTGAAATCCACATCCTCCATTATCTTGTTCATCAACGCGCTGGCATGACTTTGATCTGATAAACCCAGCAACCTTGGCAACATTTAAATTATCCAGAGCAGCATCAACTTCATCCAATATGAAGAATGGGGATGGCCTGAAACTGTGAATGGCAAAAAGCAATGCCAGGGCAGCGACAGTCTTCTCACCACCAGATAACTGTTCCATATCTCTAAAGCGCTTTGTCGGAGGCATAGCTGTGTACTTGATTCCATGTAAAAATGGCTCATCTTCATTTTCTAGATTTAAATATGCTGTTCCTCCAAGTAGATGTGTTTGACTTTTTGTTAACTCCTTATAGATTTGGTCTATGCCTTTTGATATGTGATCAAAGGCTTCCATGAACAGCTCATACCTTCGTTGCTTGACAGAATTGTACTTGTCAGCTATCTCCAGCTCTTCTTTTCTTGCTGCTTCAAACTTTTCCATAACATCCTTTTCCTTCCTTTGCAATGTTTCATATTGGTCGAGCGCTTTCAGGTTTGGAGCAGTGTGCTCAATCTGAGCAACTAGATCCCCTATTTTTTTTTTGAACTCTGCCTCAAGTTTGTCACGTTCAGAAAGCCGCATATCTTGTAGGTAGTTTTCGCTAAGCTGACTGTAGTCAAGGATTGGTATTTGTGAAGATGATCCAGTATCCATTGGATCATTAACTGTAGGAAGCTTCAGTTGCTCCAGTTCACACTTCTCATGAATCTCCCGTTCCTGTGATCTAAGTTGCACAAGCTTCCCTTCCTTTGACTTCACTTGGCGATCCAGCTTTGCCAAAGCTGCAGCAACACTACCATTCTTCTCCTTCAGCCTCAGCTTTCAGCTCTTCCATCTGATTTGAAATTTGTTCAGCTTCCGCCCTAGCTTCAGACTCTCTCTCCTGTAAACTCTTAAGTTCCTTCTCTAGAGATTCACGTGTCTCCTTTAATTTAATAATTGGTGCCTGCATATCTCGTTTTTGTTCATATTCCAGCTGGTATTTCAATTTTGACATTTGATTACTCAGGCTTAGCTTCCTCTCCTGTAGTGCTTGAGCATCTTTAAGTTGCCTCTCTTCATATTCACGGATGTTCTTCACCCCAACTGACTTGCTAAAATCTTTGTAAATACGGTCCACAATCTCATTTATTTTTTTCTCAAGAACTCTCACTTCCCGTTCCTTTTTACCAATACGGGTCTCCAACTCCTCCTTTACTGGCTCAAGACGATCGATCTCTTCCTCTATATTACTCTTCTCAGATTCCAATCTGCGTAGCTTCTCCCTGAGATTATTCTCTTCAACATTCAAGTAATGTAACTTTTTCTCAAGTCCAGTTATTTTCTCAGACACAGCAAGCTCCTTTCTCTGTAACTCCCTGGGGGATCCAAGTTCTGACATTTCAGATTCATACTGATTTTTCTTCTTCTTCCAAGATTCTATTATGCTGTCATCCCATTTATTAGATCTAGCTGCCATTCCACCGCTTATTCCACCAGTCATCGTGCCCGATTTAGTCAGAAGAATCCCATCGACGGTAACAACCTTGTACCTTTCACCACTCCAACTTAAGGTTTTCGCTTCATCAAGTTCATCACAGACAAGCGTATTTCCAACAGCATACAGAACCGCTTTCTCCAAAGCACGGTCAAATTGAATAACATCAAAGACCAATTGTGCAGACCCCCCAAGTGTTCGCAGCTTCTCAATTATAGGCTTCACGCGGACTGATTGTAAAGGAATAAATGTCTGAGGAGGAAGGCGTTGCTCCTTCAAGTACTGTAGCACATAAGAGATAAAGTGACATTTATGGTTTTGCCATTTCAATGATCCAAGTAGAAAACAAATAACTACCTTACACAAGAACATCAAAGGGTAACCAGCATAAATGGATAATGAAATCATAACTCCAAATAGAAATTGCTGGTCAAGTTGTATTTTTGGGATGTGTCGATATCCAACAGGCAATATATTTGTGATTAGAGGGAGTATTTTGTATTACTACCTATCCAACACCTGAGACTGCAGCTGCCATGATCACATATATAGTCAGGTTATCTTAATATTACTCAAATAAGTTATTTGATGAAATTTACATGGGACTAATTTGAATGGATGTGAGTCAACAGAATCCCCAAATATGATATTGATCTATCAAATGCCCTACTCACAAACTCTCCCTCCATGTGACCGTCACATCCATTTGAATGGAATCAGTTCAAACTTCTTTCAACAGTTTACAGTTCACGTGAAGCTATTCATTTTATTTCATTAAAAGAGGTTCTACGTATTTTAATTTCCAAAGGTACGCTTTGAAAAAAAAAATAAGTATTACAATTGACTACTGCAGATAATATAATGAGCTCTCCCGATATAAGAAAAATGTTGAAGAATCAGCTGAGTAAAAGTCACAAAAGAGGTACTTTAATGCATTCTTTTCCTGTGTTCTCATCTTCTACCACTACTGCATCCATGAACTTCCCCATAGCAACAGTGACAGCAAGGTTGTATTTCTTCTGTGAAGGCCTACAAAGTTCTGTCATGCGACCATGGACTCCAGGGAATAGCCGCTTTAAACTCCTAACTGTTTCTGAAAATCGAGCATCCCGCTCACTTTCATGCTTGTCAGCTTTGAGCTCTCGTAATTTTGTATCTATCTCATCCAACCTCTGCTTCAACATTTGGTATTTAACTCCTGAGGTCTGGCGCTCCTTTGCAATTTTGTTATGTTCCTCACGTAAGTGAGCAAGCTCATCTTCATGCTTGGGGATTGAATGAAGAATTTTATTAAGCTTTGCACGCAATTCACGCTCTTGTGACAAAATCTCATTCTCACGGCTACGCAGCTGCTGCATATTCTCCTCTAAATTCTTTTTTGCTTCAACGCCAGCATTAAGCTCTTTATCAAAAACTTCCTTCTCGTCTCTCAGTTTTGCAGTACTCATTCCCGCATCTTCCTTAATTCTATGATATTCCTGGAGTTGGTCATCAGCTAATTGCAGTTTGTCGCTTTTATTTTGGCCTTGCTCATTCAACTCATCAATAGCTCTTGTGACATCAACCAAAGCACTCTGCAAACTTTTCATCTCTTCCAAATGTTTCTTGCTATCATCCTTCTTTTTGTCGATCTCTTTGTTGCAGCTTTTGATTTTGGATTTCAGCCGAGAAATTTGCTCTTTCAATCTAAGAAGCTCAGGTTGTTTCTTGTCAAGTTCAAGCTTTTTCTTGGCTATACTCTTCTCGCATAATGTCATTTTCTTGAGAAACCCACTTTGCTCCTTCTTTTTTGCAGAAAGCTCATAGTCAGAGGACTGGTTCTCTTCCAGCACTTGCTGAAGAGACCGCCTATCCTCCTCAAGTTCAGCTTCTATTTTCTCTGCATCTTTTTCAATGGTGTAGAGTTGCCATAGGAGATGTTCTGTCTTGGCTAGTTTCTGGACACAAGTGAGGAAACACAACTCAATGTGAACAATGTATAGAATAAACAATGGTAAAACTGTGAGTGAGGATTACTATAATCATGTTGGTACCAAGTCCTGCTGGAGGCGTAGATGATTCTCTGCCTCTTCCTTTTGAGCCTTTTTCTGCTTCCTTTCCATGACGATGGTCCTTTTCTCTTGATAAATAAGCGCAGACTTCTCTTCGGCCCTGTTTTTTTGGTCCTCCAGCTCGTCATATTCTCTCCTGAGCTCGTCAGAGCCAGAGATCTGCTCCAGAAGTGCGGTGAGCTCCTTGGGATTCTTGGAGGCAATGGATTCCACATCACCCTGGAAGACGAGGAAATTGCGAGCCTTGACGAGGATGCCCAGGGATCTGAGTTTGGCGTTGTAGTCGTCCCAGGTGACGAGACGGCCGTCGATCCGGTACTCGCTGCCACCGGCGCCGGTGATTGCGCGGGTGAAGTGGAGCTCGTCCCCGGTGGCGGGGAGGTGGTAGACGAGGCGGACGGAGGCTCTGCGGCCCTTGGCCTCCTTATCGCGGTCGTCGAGGGCGTAGATGAGGTCCTTGAGCTGGGCGCCTCGGAGGTGGGCGGATCGAACGCCGAGCACAAAGCTTATGGCATCCATGAGGTTGGACTTGCCGGCGCCATTGGGACCGATGATGGCCGTGAAGTCGAAGAAGGGCCCGATTGTCTGCGTCCCCTTATACGACTTGAAGTTCTCCACCTCCAGCCGATGGATGCGCCCCTGCCCGCCGCCGCCTTTGCCTGCCGCCGCCGCGGCCATCGCTTCTAGGGTTTCCGGCCAACTCCAAGCGAACTAGGGTTTCCGGCCAAAACGAGATTCGAATGACGGAGCGGAGCAAAACGAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0139100.2 | 12 | 27518266 | G | C |
| Osa12LNT0139100.2 | 12 | 27518711 | T | C |
| Osa12LNT0139100.2 | 12 | 27519646 | A | G |
| Osa12LNT0139100.2 | 12 | 27523633 | A | C |
| Osa12LNT0139100.2 | 12 | 27524311 | A | T |
| Osa12LNT0139100.2 | 12 | 27524360 | A | C |
| Osa12LNT0139100.2 | 12 | 27526131 | A | G |
| Osa12LNT0139100.2 | 12 | 27526442 | G | A |
| Osa12LNT0139100.2 | 12 | 27526921 | G | T |
| Osa12LNT0139100.2 | 12 | 27526977 | T | C |
| Osa12LNT0139100.2 | 12 | 27527280 | C | T |
| Osa12LNT0139100.2 | 12 | 27527594 | G | A |
| Osa12LNT0139100.2 | 12 | 27527601 | C | T |
| Osa12LNT0139100.2 | 12 | 27521365 | C | A |
| Osa12LNT0139100.2 | 12 | 27521321 | T | C |
| Osa12LNT0139100.2 | 12 | 27528025 | A | G |
| Osa12LNT0139100.2 | 12 | 27518576 | T | C |
| Osa12LNT0139100.2 | 12 | 27517407 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0139100.2 | osa-miR5525 | Cleavage | 5.0 | 23.078 | 1 | 22 |
| Osa12LNT0139100.2 | osa-miR5532 | Translation | 5.0 | 18.338 | 1 | 22 |
| Osa12LNT0139100.2 | osa-miR5795 | Translation | 5.0 | 14.079 | 1 | 22 |
| Osa12LNT0139100.2 | osa-miR171a | Translation | 5.0 | 13.058 | 1 | 21 |
| Osa12LNT0139100.2 | osa-miR395a | Translation | 4.0 | 15.255 | 1 | 21 |
| Osa12LNT0139100.2 | osa-miR395u | Cleavage | 5.0 | 16.849 | 1 | 21 |
| Osa12LNT0139100.2 | osa-miR319a-3p | Translation | 4.5 | 8.05 | 1 | 21 |
| Osa12LNT0139100.2 | osa-miR169p | Translation | 3.5 | 19.296 | 1 | 22 |
| Osa12LNT0139100.2 | osa-miR171c-5p | Cleavage | 4.5 | 21.936 | 1 | 21 |
| Osa12LNT0139100.2 | osa-miR408-5p | Cleavage | 4.0 | 20.782 | 1 | 21 |
| Osa12LNT0139100.2 | osa-miR408-5p | Cleavage | 4.5 | 19.704 | 1 | 21 |
| Osa12LNT0139100.2 | osa-miR1441 | Translation | 5.0 | 9.277 | 1 | 21 |
| Osa12LNT0139100.2 | osa-miR1876 | Translation | 3.0 | 6.421 | 1 | 24 |
| Osa12LNT0139100.2 | osa-miR1320-3p | Translation | 5.0 | 14.825 | 1 | 21 |
| Osa12LNT0139100.2 | osa-miR2091-3p | Cleavage | 5.0 | 20.255 | 1 | 22 |
| Osa12LNT0139100.2 | osa-miR2099-3p | Translation | 4.5 | 15.881 | 1 | 20 |
| Osa12LNT0139100.2 | osa-miR2872 | Translation | 5.0 | 12.101 | 1 | 21 |
| Osa12LNT0139100.2 | osa-miR2928 | Cleavage | 4.0 | 16.913 | 1 | 20 |
| Osa12LNT0139100.2 | osa-miR3982-3p | Translation | 4.5 | 22.183 | 1 | 21 |
| Osa12LNT0139100.2 | osa-miR5073 | Translation | 3.5 | 8.05 | 1 | 23 |
| Osa12LNT0139100.2 | osa-miR5149 | Cleavage | 3.5 | 18.214 | 1 | 22 |
| Osa12LNT0139100.2 | osa-miR5149 | Cleavage | 4.5 | 13.922 | 1 | 22 |
| Osa12LNT0139100.2 | osa-miR5155 | Cleavage | 5.0 | 20.711 | 1 | 24 |
| Osa12LNT0139100.2 | osa-miR5160 | Cleavage | 5.0 | 14.14 | 1 | 22 |
| Osa12LNT0139100.2 | osa-miR5498 | Translation | 4.0 | 20.76 | 1 | 21 |
| Osa12LNT0139100.2 | osa-miR5498 | Translation | 4.5 | 13.171 | 1 | 21 |
| Osa12LNT0139100.2 | osa-miR5498 | Cleavage | 5.0 | 13.766 | 1 | 21 |
| Osa12LNT0139100.2 | osa-miR5499 | Translation | 5.0 | 8.318 | 1 | 21 |
| Osa12LNT0139100.2 | osa-miR5500 | Translation | 5.0 | 13.125 | 1 | 22 |
| Osa12LNT0139100.2 | osa-miR5083 | Cleavage | 4.0 | 17.306 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0139100.2 | 12 | qDRS12-1 | Resistance or Tolerance | Drought tolerance | RG181 | RG958 |
| Osa12LNT0139100.2 | 12 | qLEI 4 | Resistance or Tolerance | Submergency tolerance | RM5479 | C901 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)