>Osa02LNT0140300.1

CTACGACAAAATTCAAAGGAAAAAAAAACTCTTCTAAATGTCTATCCTATCCTAACCTTGGAAATGACTGAAAAACAAAAAACCCAACTTCTTCACGTTGGAATCCGGTCTGCCCACCTATAGGCCTGTAGGGATATAAACCTTCAAAAAATAATTGAATTCTTCATACCTCTAAATTCTAATATGATAATTTTTGTATACTGTATGATCTTTTGGTATCATGTCATGCACTCTAAAACCTAAGAAAGATGATCTAAATAAATAAATAAATAATGAGGATCAATTTCCCTCATGCTTCGGCTGCTTATTGTCATTAGAGCTGGTGCCCTGCTCCAATGAGGCCTTCACAAATCTGCCTCTGACACGCCTTCGCGTGTCTGCTGTTGCCTTGCGGGAGGCGTACATTATCTGCTTGACAAACCTCCTGTTGCTCTTTTTCTCCTTGTATCTCTGCACAGCTCGCTGTCTCTTCTCCGGATCAGGGCAAGATTTCTCGGGCAGCACGATATGCGAGGTCTGTTGATCTTGGCCGTCAAACATGTTTGAGCTCCCACCCAGCAGCGAGCCCGTGTTGGAGCTCTGAAAATTCACACAGGGAAACTCTGAACCTGTGTTGTTGTTGCTACTGTTTGTGTCTATCACCGGTAACTGATCATATGCCGTTTCGTCGTTTATGTTCAGTGGTTGCAGAAGACTATGATCTGAAGATTGCGGTATGAGCTGTGCGAGTTCTGAAGATGAAGTTGCTGCTCCTATCTCGTTGTTGATGTTCGCGTCCATCATCGGTAACTGAACATAAGGTGCGTTGCTCATGTTCAGAGGCTGCAGAAAGCTAGTATCTGATAACAGTGCGATGTCTGAACACGATGAGGATGCCATTTGCTGATGATCAGGGTCCAGATAGGATCCCAAATCGAAATAAGAAGGATCCAAATCCAGATAAGAAGGTTCCATCGTTTACTTGCAATGCTCCTGGTTCCATTAGTGCGACTGAATCAAACGAGTTTGTCCAGGCTTGAAAGTAATCTTGCTGATTTGCATTGTCAACAAGTAAATCTTCTCCACCTATTGTCGCCATCTCTTTACTAATGTCAGGATTCGCATCTTCAAACATCTCAAATGAGACATGTGTGTATATATATATTAGTATGCTTATGTTAATTGAATGATGGTAATAAGATGATATGTTAGTCATATAATGGAATGCTATATATTAATGGGATTGATCAAGGGATGAATTAGGTAAGGAAAAGAAATGCAACTCACTTTTGTTTAAGAAGGCAGATCACTTAGAGATTTAAGAGTTTACCATTGGCTTCTTTTAATACCAGATCACTTATTTTTAATACCAGATCACTTAGAGATTTAAGGAAAGAATGAGTTTACCATTGGCTTCTTTTAATACCTCGGGATAATAACAATAATTTGTATAGCTCATACTATTGTCGTATGGGACGAATGGGAGTGTGTCGGTGATCCACGGCTCATCCGTCGCCGCCGCCGCCGGCGGCGGCGGCGGTGCCGGCACGTCGATAGAGAAGATGCGGGCCATCTCGGCGGGGCCGGGGATACCGGTGTAGGCGGCGGC

Explanation	CPC Score
noncoding	-1.13949

Transcript ID	Chromosome	Locus	Ref	Alt
Osa02LNT0140300.1	2	549425	G	A
Osa02LNT0140300.1	2	550071	A	G
Osa02LNT0140300.1	2	550105	A	C
Osa02LNT0140300.1	2	550782	T	C
Osa02LNT0140300.1	2	550877	T	G
Osa02LNT0140300.1	2	551128	G	C
Osa02LNT0140300.1	2	551131	G	C
Osa02LNT0140300.1	2	551134	G	C

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa02LNT0140300.1	osa-miR5543	Cleavage	4.5	12.599	1	21
Osa02LNT0140300.1	osa-miR5836	Cleavage	2.5	18.58	1	21
Osa02LNT0140300.1	osa-miR171a	Translation	5.0	16.464	1	21
Osa02LNT0140300.1	osa-miR399h	Cleavage	5.0	23.881	1	21
Osa02LNT0140300.1	osa-miR399k	Cleavage	5.0	23.881	1	21
Osa02LNT0140300.1	osa-miR1320-3p	Cleavage	4.5	14.755	1	21
Osa02LNT0140300.1	osa-miR2092-3p	Translation	4.5	15.377	1	22
Osa02LNT0140300.1	osa-miR2098-3p	Cleavage	4.5	16.74	1	20
Osa02LNT0140300.1	osa-miR2118b	Translation	5.0	20.698	1	22
Osa02LNT0140300.1	osa-miR2118n	Translation	5.0	20.698	1	22
Osa02LNT0140300.1	osa-miR5080	Cleavage	5.0	11.489	1	21
Osa02LNT0140300.1	osa-miR5508	Cleavage	4.0	8.469	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus