© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0011400.1
CTAGAAACTACAGTAGAAAAGTAAGAAAAGTACAACTCAATAGATCCCTTTTTCTCAAAAAAGAAAGAAAAATATCAACTCAACAGGTCTGAATGCCAATTTCCTTATAAGATTAGCTAACACGACATGAGTATATTTCTAGAAATCAACCGGGAAAAAACAATCTAGCAGAAAAGAAAAACCATACCAATCTAGCTGAAGAATGTTCAACAGGAGAAAAAGGGGAAAGCTGTAACTAACATTATTTTAACACTTACAACATTCATAACATCAACCGTTTCATCGACCACATAGATAAAGACATACATTATCTAAATCCATTTTGACAGTTCCAAGTCCCATTGTGATGGTACTGCAAAAGAATGAGCAACTGGAACACATATCACTGCTAATATACCAAATTTCTTACCTTCTGAAACTACATGACAGAAAATAGGCGCTAAGCTGCTAAGACAGTACCACACCATTGACTCAGATTCCTCACATAGGTGCCCTGAAAATCCGGGAACCGCTCTTTAGGTACTAAAAAATGTAACATAACATTCCATCAACATCTCTTAGTAAGATGGATGCTACCAAGTCCGTATCTGTTATAAGTAGCGATTCGCAATTCATTAACTACTTTGCCACTCTTACCTGGAACAGGACCTCAAGGACTTACCTTTGTGTCAGTCAGTTTCTCAAACCGTAAAAGAGGCTCTCTCTAAATGCATTTAAACTGCACAACTTATGGTGAAAAGCTAAAACGAATGTTGAACTCACCACTAGGCAAAAGCTAATACCGCCCATAGGTCCTCCCAAAGTCATCATGTCTCTCATGCTCAAACTCGCTGTATGCAGCATGAGGCCTTGGGGCTGAATAGCTATCAGTAATATACGGATATTCACTCTTCGAGTCATTTGGTGGACCAGTAGCAGCAAATTGTGTAGCTCTCTGATCATAGTCTGGATAAGAAGTTTGGGCATAAGAAGTCGGATGAGCTTGCTGGTGCCTTTTAAAGCTTTGTTCAAGAAATTCATCCCACTTCCTTGAATGCATACTCCTCATGGCTGTTACTCTCTTCATGTGGTTTTCTCTCATTTCTCTCAATGACTCACGATGCTTGTAGTTCTCTTCATCCTCCTCTTTGTCACGGGCTATAGCTAACTCCATAGCTTCTCTTTTGAACTCCATTTCAAGCTCTTCCAAAGTTTGAGGATAGGAAGGCAGGTCAAACTTAAGGCTTAATCGGGAATCGGTTCCACGCGTCTCAGTGCTCCAGGTATTTGGCACATATGTAGCTGCATATTGGTTATTCCCATCATTTGATCTAAGGGAATCATCAATATATGAGGGTTGACATGGAGATTTTGATTGGGCTGGACGGCCTTTAGCTCCATAGTTGGCAGAAGCTTCAGCAAAAGGAAGAACATGCAAGGCATGCATTTTAGTTCCAGATGACTAAGATAGTACGACTGACACCTAAGTAGACTTTATTGTACACTGAAAGGAGGAATAATGCCAGATGCAATACACAAATTGCAGGCCATCCAAGTCAGATGTCTGGAAAACCTTTCGATATGGAACTTGTTGTATTCAAGTAAATTTGTCTGATCATAACCAGACATACATTGAGTCATTTGAGCACATAAATCTTGAACTTACCTCTAGCTGCAAAAGGAACCAAACAAATTACCATAGATGGTGGTAACCAACAAAAAGGGATCAGAGGCATTTTCTTTATCTCAAATCGTCTAAAATGCCTGGCTCCTAATATTTGCCGATACAACAATGATAAGACGAGTGTGCTTGAGCGCCCTACCTTGTGGAGATTCTTTCGAAAACTTAGGCATATCATCATGTGAACGGCCATCTAGAGGCCTTTCGTTATAATATCCTTTACTTTGAGAGCGCGGAGCACTTCTTGGACTATGTGACCATCTAGAATCAGTGTGCCTTGGGCGAATATCACTGGTAGTTCGCACAGGGGATCTCAAACGATCCCGTTTTGGACTGCTTGAAGTATTTTTACCTTTACCCTCCTGAATGATTTTATGAACAGCATCGACACCTTTCGCTAGTATTAACCTATCTTTACCACTGACAAACAGGAACTTCTCATCCATTTTTATTTTACACCCCACATCCTTCTCAATCTGACTTATTGTCCTCTCAGTGAATAGATCCCTGACTTGTTTATCTCTTGCTGGAACTCTTTCAAAAAAATCTGCATTTCTCCTATTTGCTCCCAGCGTGGATGGACAACCCTGAGTAAAATGACCTGATTCTCCACATATTTTACAAATCATTTCTTCCTCCTTTCTCTTCTTCCAGTTCCTTTCTGTAGCTTTAGCTTTAGCCTCCCAGACTTTGGCTTCTCTGCTAGTGAAGTCAGTAGGGACAGCATTGGGATCTGGGGGGCCATCTTCCTCATCTGACTTTTCACGTTCGAGGGGCCTCTTCTCATCATTCACTCTAGGCGTCACATTGTTAGTAGTTGTTGCAACTGGACCACTGTATGCCTTCCCATAAACTTCATTGAATAGTTCATCATCAATTTCAGGACTTGGTTCCCTTGCCATTGGCAGATAATAATCTATTCAAGCTAGTCTTTGCTATGAAAAGCTGCTGATGATGGAGGCGCGCCTCTTCGGCCTTCGGGAGAGGAGGAGGGGGCGGCGGGTGAGCCCCGCCAGGCCAGTGGTAGGGGGCCTCCGACGACGAGGGCCCTCGCCGTGGCCGCCGGCGCCGTACGCGGCGGGCGGGAGGGGGGAGGGGAGGGTTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0011400.1 | 1 | 8359775 | G | C |
| Osa01LNT0011400.1 | 1 | 8359151 | G | A |
| Osa01LNT0011400.1 | 1 | 8361311 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0011400.1 | osa-miR5818 | Cleavage | 5.0 | 22.481 | 1 | 21 |
| Osa01LNT0011400.1 | osa-miR6252 | Cleavage | 4.0 | 14.134 | 1 | 23 |
| Osa01LNT0011400.1 | osa-miR5079b | Cleavage | 5.0 | 13.76 | 1 | 22 |
| Osa01LNT0011400.1 | osa-miR156k | Translation | 4.5 | 9.8 | 1 | 21 |
| Osa01LNT0011400.1 | osa-miR1869 | Cleavage | 5.0 | 10.396 | 1 | 24 |
| Osa01LNT0011400.1 | osa-miR5076 | Translation | 4.5 | 16.563 | 1 | 22 |
| Osa01LNT0011400.1 | osa-miR5076 | Translation | 4.5 | 9.077 | 1 | 22 |
| Osa01LNT0011400.1 | osa-miR5076 | Translation | 4.5 | 9.031 | 1 | 22 |
| Osa01LNT0011400.1 | osa-miR5079a | Cleavage | 5.0 | 13.76 | 1 | 22 |
| Osa01LNT0011400.1 | osa-miR5338 | Translation | 4.0 | 20.996 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0011400.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0011400.1 | 1 | An9 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0011400.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0011400.1 | 1 | nan | Morphological trait | Root | RM7383 | RM23 |
| Osa01LNT0011400.1 | 1 | nan | Resistance or Tolerance | Insect resistance | RM576 | RM3412 |
| Osa01LNT0011400.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0011400.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0011400.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)