>Osa02LNT0143200.2

GGAAGAAAAAAAATTGTGACATATATTCAACTGAATCAGATTCTTTGTCGTAGCAAAATCACAATGTTTGGGACGGCATTATCATTATTTTGATTGGTACAGTTTGACAACAATAACACATTTGGACTGAGCATCACACGTACTCAACTTTCTCTATTGTCACCAACTGAATGCTCAAAATTTTGTTAGCTTCTTCATCTTCTGTTCTTCAATGTTTAACAGTCTTTCTTTTCTTTCATGAGCTACTCGAAGATGGGTAGATCAAGAGGCTTATTCTTTGACCCATCTTGAGTGTCTCTTGAAGATGATGAGAGAGAGAGAGCAGAGAAGGCTTTTGTATCAGATTCTTTATCCATGTCCAGGAAGAACCGATGCCATCTAGAGTCTGATGTCAATTCTGGGTGAAAAGCAGTAGCGAGGATGTTCCCTTGCCTTACAGCAACAATTACCCGATCTTTCGAGTACACTTCTTCCTCAACACCCTCTCCAGACGCTATTGTAATACTGGGTCTATCCGATGGAACAGGACAATCCGCCAGTACTTCAACATTTGAACCTACATCCAAGATAGCAGGTGCTCGTATAAATACGCCACGGCATGTATCGCTCCCTCCTTCCTTCTCTGCAAGCATTGGCACTGAAAGTTCCGTTTCAAAGCTTTGAAGCTGGCTCCCAAAAAAGTTCCGGTGGACAGTACAATCTAGTCCTCCAATAAGCTCCTGACCTCCGGATTTTTGGCCTACTGCCTTGTTAGCTAGGAAGATGAGTCCAGCACAAGTTCCCCAGACAGGCCTTCCTGTACCAACAAATTCTCGAAGTGCAGGAAACTGCATGGTAGATGAAATAAATCGTTGCAACATTGTGCAACATTAAAATAAGGTAATAAAAAACTATGAGTTATAAAAAAGGTTAATATATAATTGTATTCATGCAGTACATGAAGACTCAATCTCCACGAAGTAGAAAATAATCAAGTACGACGGGTGTGAATCTGGTTCTTATGAAAAGGGGAATGTACTCGTCATCTCATCTACATGTGAAACTAATTGTACACTTATATGGATGTATACTAAATAATAGTATGTGACTAGTCACAGTTTCACAATACTCAGGGATGGCGGATACGGACGAAGGAATTTACCTTACCAGCAGCAGGTAGCAAGCACTGGTCTACTTCCACCAGCAAAGCTGTCAAGTCTACAGCTCATCATTCCTTATATATAAAATGTTGGACAAAGACATTCGCAGTTTCTAGTTATGGCCTTGTAAGCGAGGCTAAAAAACAACGGGAATCTATATCTGCAACAAGTTGCTCTGATGGAGCCATGGGCTACTAATATCCCATAACCTCATCTGTTTTTCTCTAGATTAGTTATTCTGTTCTGAAAGCTTAAAAGGGATGGATATGAACCATAAATTCGTATAATAGGATTAACAATAGTTCTCGAACGTGCAGCCCTTTCAGAATTGTATACTCACTAGTAGTCAGTAATCAACACAAACACATAGGAAGAAGAGAAGTCTAATTTGCCTTCCATATATTACTTTGGTTGATCTACCACCAACCCTCCTCCGTAGTAGACAGTAACAAAAGAAATGCACATATTTGGACTAGTTTTGACCAATGCAAGGGAGCAAATCAATATTTCATTTACATGGATTATTGTAGTGTTTCTTCAGTCTGATCAAAACTGGGCTAGTTGTTCGGAATGCAAAACACCGGGTCACTTTTGAGAACTTTCAACAATTGCGACAGTTTATTAGTACACATATCCCTTTCCTCTGTTTTGAGGAGAATCTAACCAAGAAGGAAATTATCACTAGTGCCCAATTTATAATCCTCTCACTGAACATCGATCGTGGAGATTCATGCATCGCATCAATTCCAATAATAAACAGATACAAATGATTTGCTAAAACGAAAGAACAGCAACCAAAAGAAGAATGGGGGGAGTTACCAGGTTGTGGTAGTTGGCGAGTTTGGCCATGGTGGTGCTCTCGCCGCCGGGGATGATGAGCGAGTCGAGCCCCTGCAGCTGCTCCGGCTTCCGCACCTCCACCCCCCTCACCCCGATCCTCCTCAGCGCGGCCAAGTGCTCGTTGAAGGAGCCCTGCAGCGCGAGGACGCCGACGACCGCCATTGCTGCTGCTGCTGCTGCTGCTCCCCTCCTCTTCTCTCGCTCGCGTTGGGATGTGTGGCTTTGGCTTTGAATTGGGGGGTGGGAAGAAGTGGACGGGAGAAGCACGTTGCCGTGGCGGCGGCCGCCACACGCACGCGCCTCCACCTCCACC

Explanation	CPC Score
noncoding (weak)	-0.694483

Transcript ID	Chromosome	Locus	Ref	Alt
Osa02LNT0143200.2	2	1566373	G	C
Osa02LNT0143200.2	2	1569288	A	G
Osa02LNT0143200.2	2	1566209	T	A
Osa02LNT0143200.2	2	1569357	G	A
Osa02LNT0143200.2	2	1568065	G	A

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa02LNT0143200.2	osa-miR5796	Cleavage	4.5	22.886	1	21
Osa02LNT0143200.2	osa-miR5830	Cleavage	4.0	23.521	1	24
Osa02LNT0143200.2	osa-miR5830	Cleavage	4.0	20.607	1	24
Osa02LNT0143200.2	osa-miR812a	Cleavage	3.5	13.881	1	22
Osa02LNT0143200.2	osa-miR812b	Cleavage	3.5	13.881	1	22
Osa02LNT0143200.2	osa-miR812c	Cleavage	3.5	13.881	1	22
Osa02LNT0143200.2	osa-miR812d	Cleavage	3.5	13.881	1	22
Osa02LNT0143200.2	osa-miR812e	Cleavage	3.5	13.881	1	22
Osa02LNT0143200.2	osa-miR1439	Cleavage	3.5	14.848	1	21
Osa02LNT0143200.2	osa-miR1846b-5p	Cleavage	4.5	19.99	1	21
Osa02LNT0143200.2	osa-miR1846c-5p	Cleavage	4.5	19.99	1	21
Osa02LNT0143200.2	osa-miR1846a-5p	Cleavage	4.5	19.99	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus