>Osa02LNT0144000.1

AGGCTAGACAATAAATTCCCATTGGTAGTAAGCGGTAGGTTATAATGTATACAAGAATAAATAGCGATGTTACAACCACGTCGCCGATGCATGTACCACTGAATACATGTGCTATCCTAAACAGAACATAATGATAACACAATCTACCCATCAGCTGAAACTTACAAGTCCAAAGGCTAACTACATATTCACAACTAGTACAATTATCCAACCATGGAAATAGAACATCCAGGCAAAGCCAGATTTCAGCCTGCTTCCACTACCTCTACGTTAGCATCTGCCTGCAGCACACCACTGGCAAAAGCGCATTTAGTCTCAGCTAGCGTTGTGTGTCTGGTCATGCTCAATGAAGTCCAGAGCTTGCTCCTTTGACACCACATTGATGTAGCTAACCCTGTTCTTGTGCGTCACACCATAGATCTTATCAGCAACTTTTGCAATTTCTGGTCGGAATGTCGTTGCTATAAACTGAGTGTCAGCCATGTCAGCTAGACGGCGGATCATATTGCCGACAGCTGTTCTGTACTGTGGATCCAGAGCAGCATCGATCTCATCAAACAGATAGAATGGGGCTGGATCACAACGCTGAATGGCAAAAATCAGTGTCAATGCCACCACTGTCTTCTGTCCACCAGACAACTGTTTCATAGACTGTGTTTCTCCCTTGCCAGTAAAGGAAACCTTGACTTTTACACCAATGTACTTCTCAATTCTCCCTTCAGGATCTGGTTCACGAGGCCCATCCTCATCATTATCATCATCATCTGCATCACCATCCTTTTTCCTCATCATAACCAAATGTCCATGGCCACCTTGCACTAGTTCAGAGAACACTTCACGGAAGTGCCTTGCAACACCTTTAAATGTACGTTCGATTGATTCGTCCTTCCTTTGGTCTAAAACTGATATTAGTTCTCTGATTTTCTGATCACCAGCATCAAGTTCAGCCCGTCTTCTCTGTAGTTGTTCACGTTGTTCGGTGAAGTTAACATACTGGTCAAGAGCTTTTTTGTTGACATGACTGAACTGCTGCAATTGCTCATTGCAGTCATAAAGCATCTTCTGCAGCTGCTTCTTATTTTTCCGCTTGTACGTTTCAAAAGCATCTGCAGGCAATGAGCCCAAGTCTCGGATCTTCTTCATACACTCCTCTTGCTTAGCTAAATGCATGCTCCTGCTGCTCATGAGCTGTTCCAAATCCTTGGCACCATCTTGTACGGTCTGCTCCAGGTTAGCTTCTAGTGCCTTCAGATCATCTCTCTGTCTTTTCAGTTCCTCCATCTTCCTTGTGAAGTTATTAATAGCATCGACATTAGCCTTCAACATTGCAGTCAATTCATCAAGACTCCTCTTCGAACTTTTTAGTTCTTGCTCTTTCGATTCAGCTTCAAGAGGCAAGGTCTTAGAGTCTGCAGATGAAATTATTGCTTCAAGCTCTTTCTGGCGCCTCATAAGATTAGTTGATAGATTGGTTTCCAGTTCTTCTTTCCTTGTTTCAATCTCGATGCGACTGTTTTTACATAAGAGAAACTTCTCCTTTAGTTCAGTAATTTCAGGGTTCAATCGTGAAAGAAGATCTCGTTCTTCTGAAGTTAACTGATCAATAAGTTCAGTGCCCATTTCATCATTTTTCATTGCAATGCCAGATTGGATTTGCTCAATTTGGTTCCGGATGTTGTCAAGTGATTTTTCCTTCTTTCCAAGTGCCTTGTCAAGTGATACCATTTGCTTCATAGCGCTAGCGATGTCAACCTTAAATTGTTCCAACTCTGATTTGGCATGGTCACGCTCAGCATCCATTTGCTGCTGTTTGGTAACTAAATCT

Explanation	CPC Score
noncoding (weak)	-0.720937

Transcript ID	Chromosome	Locus	Ref	Alt
Osa02LNT0144000.1	2	1755752	T	C
Osa02LNT0144000.1	2	1755473	T	C
Osa02LNT0144000.1	2	1755503	A	C
Osa02LNT0144000.1	2	1756464	A	C
Osa02LNT0144000.1	2	1757033	G	A
Osa02LNT0144000.1	2	1757276	A	G

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa02LNT0144000.1	osa-miR5796	Cleavage	4.5	14.645	1	21
Osa02LNT0144000.1	osa-miR5836	Translation	4.0	14.686	1	21
Osa02LNT0144000.1	osa-miR399j	Translation	5.0	17.762	1	21
Osa02LNT0144000.1	osa-miR172c	Translation	5.0	20.01	1	21
Osa02LNT0144000.1	osa-miR1425-3p	Translation	5.0	18.78	1	21
Osa02LNT0144000.1	osa-miR1847.1	Cleavage	4.5	23.222	1	21
Osa02LNT0144000.1	osa-miR2095-5p	Cleavage	4.0	9.127	1	22
Osa02LNT0144000.1	osa-miR2104	Translation	4.5	16.932	1	22
Osa02LNT0144000.1	osa-miR395x	Cleavage	5.0	15.818	1	21
Osa02LNT0144000.1	osa-miR535-5p	Translation	5.0	13.388	1	21
Osa02LNT0144000.1	osa-miR1428e-3p	Cleavage	5.0	14.847	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa02LNT0144000.1	2	S29(t)	Physiological trait	Sterility	nan	nan

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus