>Osa02LNT0144100.2

GCTTGCTTCCCACATTCTCTAGATGTGCTGCCTTTTTCTCAATTGCAGTTTTATTGTCCCTAATTATTTTCACAAACTTCAGTTTTGAGCGTCTAGAGTCATAGAAACCTCCTGTCATGCCACCTTTTCTGGCAACTTGATCACCATCAAGTGTGATGCAATCCAGCCCATTGCCGCGTGCAACTTTGGTCGCAGTTTCCAGGTCTCGGCATATTACTGTTCTGCCAAAAACCTGTTCAAAGGCACGGCGATGATCGGCCCGATATTTTAGTTTCTTCAACAATGGAACGAAATCGGGACTTTGGGGGCAACTAACATCTGGAACTTTCACTCTATTCAGTGGTATAAAAGTCACCCGCCCACCTTTTTCTCGAGTCAATACTTGAATGATTCTTGTTGATATATCGTCATTCTCAACAACCACATGGAACAAACTGTTCCCTGCAGTGACCTCAACAGCAGTGAAGAACTTCTCTTCACAATCAACCAGCTCTAAAACAGGACCAAAAACTCCTGTAATACCATGGTCCCTGATGATTCTGCTAACAGAATTCAAGCCTCTTCTGATATCCCCAGGTGTTGCATGGTCCAAACTCTTTTGTGCCTTCACAAGATCATCCTTTAGCCTATCAATTTCAGCTGTCACATCAGCTTCCTCCTTCCAAAATGATTTCCTTTCTTCTTGAAGCTCATCTCTCTGCTTCCTCAAGTCATTGTAGTCATTGTGTTTCTTTGCTAGTGCAGACTCTAATTTGCTTGATTCACTTTTCCGGGACTCAATGTAGCTATTCAAGTTATTGATTTCATCTTTAAGCTTCTGGATTTCTTCTTGAAGTAAACCTTCCTGCTTTCGATTTGATAAAAGCACACGCTCAAGATCATCAATTTCCTTTTGAAGCCACTTATCTCTGGCAGCTTTGTTTGCGAATTGGGTTGCCCTCCCCTGCTTTTGGTACAATATACTTAACCGCTTCTCACGGTCCATTATGCTTTTTGATATTTCTTCCTCTTCCTTTAATTTGGCTTGATGCACCTTACTAATTTCAGCTAATTCGGACTTTGACTTTTCACTCTCCATCCTCACGCTTTGTAAATCCTTCGCAGCTTCATCCTTTGCCCGTTTCTCGTTCAAGATTCTGTCTTTTATGTCTCTCAAATCAAGCTCAATCTGAGCAACTACCTTCAGTGCTTCTGTACGCTTCTTCTCTACACCTTCCTTTTGAGCCTTGGTATCATTTATCCCCTTAGTTGAGTATTTTATTTCTTTGTCAAAAGTCTTCACCTTCTCACGTACATCTACCACTTCATTATCCGCATGGGACATTCTTTCAGAAATTTTTCTTCGGTTATCATCCATCGAAGCTAATTCGTTCCTAGCCTCATTTAGTTCATGGTCCAGTATGGTATACTCAAGTGATCTTCTTTGTTTGTCCAGCTGCTGGTACTTCTTCAGTTCTTCTTTCTCTTCATCAAGTTCTCTCAACCTTTCCTCCAAGTAGTGGACAACTTGATCAATCTGCTTTCTTTTGTTGGCTGTTTCCTGCATGATTTTCAAACTCTCGCGTCGTCTATCTTCATAAACGCGCGTACCACCGATCTCTTTGAGGAGATCCAGCCGTTCGGAATCTTTCATTAGGGTAAGGGATGCAATCTTTCCCTGCTGGACAACGTAGTATGGATTAGAGCGAGAAAATCCAGCACTCTCTAGCAGATTCATGACTTCAGTTTTACTAACATGCTTCCCATCCAAGTAGTATTCATCCTTCTTTGAAGCAACTGTCCTGCGCAGGCGTACCTCCTCTTTGTCAACTGGAATACGGTTGTCTGAATTATCAAACACTATCTCAACAAAAGCCGAGACAACCGAGTGACCAGCACCTTCATGAAGAAGAGCGCCCCTGTCTTCACTGCGCAGGTTTTGAAACATGTCACTGAGGACAAACCGTATAGCATGGAAGAAATTTGATTTGCCAGATCCATTTGCCCCAACTGTAATAAACATGCGAAGTTGCGTTAGTTCATATAAAATTAAAATCTGCCAGGATTACTATATTCATCAGATATCGCAATTCACTCCCCTGCAACTCCACGCAGACAAGGTAAGTGCAGGTAACAACTACATTAACTTTGGGGCTGAAAGGTTCTGTTGAGATCTCCTCCCTGTAGCTCTTAAATCCTTCTATCACAACTTTCTTTATATACATGGTTGAGACAGGGTGAGCTCAATCCACCATGAAATCCTCGACGAAATGGGGGGAGAGAGAGACGACGACGACGACGCACTCCACTCCGCTGCGAGGGCGAGCGCGAGCGCGAGCTAGGGGAGCAGTGGAGTAGCTAGCCGAGGAGCGAGAGAGAGAGAGAGAGAGAGAGGGGGGGAGAC

Explanation	CPC Score
noncoding (weak)	-0.969583

Transcript ID	Chromosome	Locus	Ref	Alt
Osa02LNT0144100.2	2	1759577	G	A
Osa02LNT0144100.2	2	1761689	G	A
Osa02LNT0144100.2	2	1763205	A	G
Osa02LNT0144100.2	2	1763818	A	T

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa02LNT0144100.2	osa-miR5526	Cleavage	5.0	5.987	1	21
Osa02LNT0144100.2	osa-miR5806	Cleavage	5.0	15.049	1	21
Osa02LNT0144100.2	osa-miR319a-3p	Cleavage	5.0	11.409	1	21
Osa02LNT0144100.2	osa-miR535-5p	Cleavage	5.0	16.712	1	21
Osa02LNT0144100.2	osa-miR535-5p	Cleavage	5.0	8.079	1	21
Osa02LNT0144100.2	osa-miR1865-3p	Cleavage	3.5	15.863	1	24
Osa02LNT0144100.2	osa-miR2867-3p	Translation	5.0	19.431	1	20
Osa02LNT0144100.2	osa-miR2921	Cleavage	5.0	21.733	1	24
Osa02LNT0144100.2	osa-miR3979-5p	Cleavage	5.0	16.933	1	20
Osa02LNT0144100.2	osa-miR5144-5p	Cleavage	5.0	12.745	1	21
Osa02LNT0144100.2	osa-miR5147	Translation	5.0	8.944	1	21
Osa02LNT0144100.2	osa-miR5155	Cleavage	4.5	12.709	1	24
Osa02LNT0144100.2	osa-miR5499	Cleavage	5.0	11.897	1	21
Osa02LNT0144100.2	osa-miR5504	Translation	4.5	14.308	1	21
Osa02LNT0144100.2	osa-miR5513	Translation	4.0	16.458	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa02LNT0144100.2	2	S29(t)	Physiological trait	Sterility	nan	nan

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus