>Osa02LNT0146500.1

GAGAGAAACCTTGGATCAACATTGCTATAGGGTAGTGGTTACATATTTACATAGGAACCTAAGATGTTGAAACCTGCTGTAAATGAACAACAATGAAGGGTTTGCTGCTATCTTATATGCACACCAAATTTGGGCTGGGATAGCATCTTCCAGATTTTTGAGAGAACAAGAAAAAGAGGCGGGTAGAGGCACAATATTCTGGTTGTGGCTGCACTGCATTACATTTCAGCTGGCTGGTTCATCCTAGTAGTATGAACGTCTGCGTCCATATCTAGGATCCCTGCAAAGATCAATAATAGTAGAAGGCGCATCAGAAAGTGTCGAGCTCAAACAAGAGTTGTGTTAATTGTGCTGGCTTTTCAAAGTACACACTCAAGACTTCTCTCAAGAGTTGAAAATAGAGTTTTCCTAGTGATTGTCTCATGCCCTATGCCTATTTTCCTAGTGAGAAAATAAACTTTTTCTCAAGGAAGAATGTCAAACAAAACTCTGCCTATTTTCGCATCTTATCATTTGGTGTCGACATGCGTATTCATGCGTTCATATCAGCTTTCGGCTACGGTCAAGTCTTTTGAGAGCTGAAGTGTATGTCCTTTTGGCAATATAACCTCTTAATAGCAACAGAAAGCAAGAAAAATAAAATTATATGCACACACCTGTAATGACTGGCGATCCTCCTGGATGCTGCAATGCCGGGCATTGCTCCTGTAACTATATATTCATCATCTATTTCATCAAATCTGATTTCCCTTATGTCAACAGATCCCGAGGGCACCTCAATAGTAAAGCTTTCTTGGCTAGACCTATTGCTGCTCCTCCTTCCACTACTTCTCCTTTCCCTTGCTCTTGCTCTACTTCTGCCTCCTGAAGATCTGCAGAATGACTTACAGAAAATACAGGATGTCCACCAGTTCCCCCTAACCCTGTGGTAAACTTCATAGTCATCTCCGGCATCATCATCACCGTACTCGATGACATAGTCTCCCAAAACTATACCATTAGGCACCTGTGCATGTATCGTGCTCAAGACATCTATGATATCTGAAGACTGTTGGAAATTCTCCCAATCAACTCTCCGAGCAGGATCAATTTCTGACGGGCGTGAATTTGGATGCTTCTGCTGGGTGTGCTTCTGAAGCTCATGAAAGTTGCCCACATATGAACAACAGCTTTCTTCGCAGCATCTTTTCTTTTGGTTAAGATGCAGACGGGCCTCGTCAATAACAACCCACCCAATAACATCGCCTCTACACAACGGGCAAGCTGGGCGGTCAGTTGTATTTGACGAAATGATATGAATGCTATCAAGAGGGGCTCCATTAAAAGATGGGACTTTCATATTGGTCGGCAGTCCATGAGCACCTTTGAACCGCTCAAGACAGTTCGAACGGGATTGGTCAGTGTCGCATATGAACGGCCTACAACCCTTCTCATATGAGGTGCACCTCAATAGGACAGCATTATGAGGAAAATCCAGACAGATTGGACAAGTGATATCCTCCATCCAACTTTTATCAAGTTTGGCATCCAAATCGAAAGAACCGGCCTTCACCACCTTCTTCTTCACCATTCCTGAACCCATACTGAACTTCCAAGATGCAGGTCTGATGCTACCGAGAGTATCTTCTAACGAAAACCGCAGCAGCAGCAGCAGCAGCGACCTCGGGGGTAGGTGGGTGGCGCCGTGGCGGAGAGAAGAGAAGAGAAGAGAGGAGAGGAGAGGAGAGATGACGAAGAGGAGACAAGCCTACTACTACTACTACCCTAGAGATGGGACCTAGACGCCTACTACTCGCCCTCCTCTCCTCTCCTCACCTCACCACTTCTCCGCCTCTCTTTCTCTCGAGCTCATGCGCTCGCTTCCGCCTCCTGAGCTGCTAGTTTATTCTTTCTTCTTCTTCTTCTATTGGGATTGTACTACCACCACCACCACCACTACTCGCCGTGGTACGAGTATAAAAAATTCCAGCTTTTTTTCCTCGCTGCCGTGAGCAAAGCGGATAAAAAACCGAACTTTTTTTTTCTTTGTGGGTGTTTCTTTGGATGTTTGGGAATT

Explanation	CPC Score
noncoding	-1.02002

Transcript ID	Chromosome	Locus	Ref	Alt
Osa02LNT0146500.1	2	2804574	G	A
Osa02LNT0146500.1	2	2805382	T	A
Osa02LNT0146500.1	2	2805491	G	A
Osa02LNT0146500.1	2	2805975	A	G
Osa02LNT0146500.1	2	2806057	C	T
Osa02LNT0146500.1	2	2806893	T	A
Osa02LNT0146500.1	2	2806929	T	A
Osa02LNT0146500.1	2	2807385	A	G

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa02LNT0146500.1	osa-miR397a	Cleavage	4.0	14.035	1	21
Osa02LNT0146500.1	osa-miR397b	Cleavage	4.5	14.035	1	21
Osa02LNT0146500.1	osa-miR172a	Translation	4.0	16.772	1	21
Osa02LNT0146500.1	osa-miR172d-5p	Cleavage	4.5	19.382	1	20
Osa02LNT0146500.1	osa-miR172d-3p	Translation	4.0	16.772	1	21
Osa02LNT0146500.1	osa-miR169r-5p	Translation	4.0	20.698	1	21
Osa02LNT0146500.1	osa-miR2930	Cleavage	4.0	21.615	1	22

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa02LNT0146500.1	2	S29(t)	Physiological trait	Sterility	nan	nan
Osa02LNT0146500.1	2	rb2	Physiological trait	Eating quality	RM236	RM279
Osa02LNT0146500.1	2	qWIJ-2	Morphological trait	Seed	RM233A	RM8

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus