© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0011700.1
GGAAATTTGGCATCAATTTAAGTTCGGAACCAACATTTAAAACAGCATCCCTTCAGTTAAAGTTCCCTAGTGAATTCTAATTCAGATAGCACTCAAGTAAGCCTTACACTTCTGTAAAAGCTGAACTGACCAAAAAATTACAGTTCGCAAAATGGCTTGACCAAAGCTATTCACATGTGGAAATAACCTATAATGGTCTAACTAGTTGCTGTATAAAACTTTGCGCAGTTCTGATGCGTAATCACCAAACTGAATGCCAGTAGGAGGATGCATGCTAAAGATGTAAGCAACTGGTGCTGATACTTGCATCCCTCTCGGGTAATTAGGGGTATCCGAGAACCATCCAAGAGTTGCTTCATCAAACATAAATGATTCACCCAGAAATAAGAAGCACTCTCTTGCCAATCTTTCGACCTGTAACTGAACAAATTTTGCGTTATTCATGATCACGATGACCTGCAAATCTGACATCTTTTCTGACAAGGTCTTGATGGCAATATGCTGGAAAAACTTCTGCAAGACAACTTGCTCGCTAATTGATTCGTTGGAATCAATATCAGCAAACCAAAATACTCGACTCAATTTTGTCCATGGAACTGATAGTTTATGTTCACCTCCAATGAATAGATAAGAGGGATCAGCCAAATTCTGTAGAATCTTGAGGCCCTTAGTCACTGAATCAGACTCGAATGAATGAGGACCAGGTGTACAGGCAATAATCTTAGTGGGGTCATAATAGTTACAAAGTTTACAAGCGAACTGTAAACTTTTATCATTCATGACAAGAATATGCCCATCACCAGCAGCAGGCAGCAACCTTTTACAACATACTGAAGTAGCTCTGTTTTCCTGAGAGCAGATTCCAGATGTGATAGATGAAGAAACCAAAGAGCCAGAGTCATGTGAAAATGAACACGAGTTACCATTTCGACAACCCTGTAATGTGAGGAAGAACTTGCATATTGGTCTTGGAGCACGAGAAGAATGAGAAAAATGGCATGTATCACCTCGATTACAAGATCCATTAAGAAAGAACACACACATCTCATTTTCCAACGCTGGTTGAACATAACCATGAACTAGTTCTCTATAAGTTACCCTGTCTGCCGCAGATTGTGTCTTCATCTCCTTGATAAGTGTCTTCAGTGTTTTAACAACAGTAGTGGTTCCAAAATCAGCTGGAGAAACATAAGGGGTTGCAGCACACCTGCGATGTGAATCCAAGTGAGAATTCTCAGCTTCTAATGGAAGTGAATTCACATTCTCTAGTTCCAGCACTTCATGGCGAAGACACATGTGGTGGAATTCGGAAGGCTGAAGGTACATTGGAGGATTTATTTTCACAAGAAAACTAGGTCTAAATCGGTGAAGTGTGCCCATAATATCATCATCTGTTCAAAAGGAAGGGTTAGCAACACATATATCATATTGGAAACACAATAGGACACATGCCTCATACTAGGTATGTTTCTTTACACAAAGCACATTTATACATAACTGCAAGGTGCACCCTTTCTACTATGTCTTGTACATTTTCAAAATCATATTGGAAAACCTTACATGGAAAGTAAGAAAGGTAATCAGCATATATTTAAAAAATGTGAACATATGTGCAACCAAAATATACAGCAGATGAAGAGTGAGATTACCTACTGCTACAAGAGTGCAATTCACTTCATAAAATTTTTATAATGAGGTACAGGTAAAGGACGTACAAATTTCAGAGATGTAGTTAAGTGCTGTTGGCACAAGGTTATGAAATGCACACCACTCATCTTCAGGTTTAGCAACAAAACCATTAGATGCCTTCGGTTCATGAGTGTTCACCACATTTATCAGACAATCCAGACGATACTTGTCCTTAAACATACGCTGCCAGAATTGAAATGCACAAAGATTTCCAACAAGTGCAGCTTCCTTCTTGCCAGTTTGCAGGTCGATACCCTCCTCCTCAAAGTAATTGTTTCTATACATTTTGCACAATTGTTGGTGACCAAAAGGTTGGACGATAGGCAGGGGTTGGATGTCCAGCATGATGCTTATCAGAATTCCTTCACAGATGGAGCCAGTATCACCAAATTTAAGGGCTAGAACAGAAGCGTCAAATGAGAGTGGCAAACTATTAAGCAAACATCCATAAAAGGTTGGCTCATGGCGCCCTCTAGGAGAGGTTGGCTTATCTAAAGCACGAATTTGAACAAGAGATTCCAATGCATCTTCAACAACATCCGAATCTGGCGGGTCAAGAACTTTTTGCAGCAGGACATGAGGATCGTTCATAGCTCTGGACTCTGCACAACAAATCATGAGTACTTGCTCTCTTAAGGACAATCTTAAAATGGCAGGATACTCATGATCAGTTAAACTGTTATAAAATGGCCCAGTTACCAAGCGATAAATTTGACCATCACAGGTTCGCCCTGTCCTGCCTTTCCGCTGTTCAGCCTGAGATTTGGAAACCCATACAAGCTCAGCTGAGTCTGTTTTCCTGATTGGATCCCAATAAACTTGCAGTGATCTACAGGAGTCAATAACATAAGCAACTCCTGGAATAGTGACTGATGATTCTGCAATGTTTGTTGCCAGTATAACCTTACGACAGGACTTTGAGACCTTCATAGTTTGAAGAGCTTCATCGGTGTCAATGCTGCGATGGAGAATGTGTACTTTGAACATTGAACTAGCAGATAGCAGACGAATCCATTGCTGCTCCAAAGCATAGTATGTAGGAAGGAACACCAAAATACTCTTCCCAATGTCTGGCTCATTTTGGTGTATATGCAACAATAACCTATGAATAAGTTCATACACATCTGGTTTTAGACCAGCATCAGCTGCAGTGTTGGGTCCAGAGCAGTATTTTGTTGATAGTGATTCCGAGTCCATCTTGAGAATATCAACAATCTGCTCAAGGTATAGGACTTTTCTCTGAAAAATGCTACTGCGTGGACTGCTAGGAATGGCAATCACCTCAACCCTTTCACCCCTTCCAAGATCTCTGAAGTAATCCTTATATCTTGTGATATCAGCAGTCGCAGACATCAAAATCAACCTCAAGTCATTCTTTTTCATCATAAACTGCTTGACACAGGCGAGGACAAGGTCAGATTCCACTGACCTTTCATGTATTTCATCGAGAATAATAACCTTATAGTTCAATGCAGCAATGCCCTTGTCACGCATTTGCTCCAATACAACACCAGCTGTTTTGAAAACAATTCTTGACCTTTTTGAATTGAGATTGGACACATTCGAGTGTCCTATGTGATATCCGACCTCTTCTCCTACCTGACAATTGCGAGATTCGGCAATCATTTGAGCAATGGCTACTACTGCAAACCTCCTTGGCTGCGTGCATAGAATGGGTTCCATGTTTTCTTCCAGGAGGAACTGTGGAACCATAGAACTCTTTCCGCATCCGGTGTCCCCCACGATGAGAGTGACGCGGTTCCCCTTCACCTTCTCCACGATCTTCCCCCGGAGCGCCTCCACGGCGAGCGGCGCCCGCGCCTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0011700.1 | 1 | 8563860 | T | C |
| Osa01LNT0011700.1 | 1 | 8566212 | C | T |
| Osa01LNT0011700.1 | 1 | 8567632 | T | C |
| Osa01LNT0011700.1 | 1 | 8568513 | T | G |
| Osa01LNT0011700.1 | 1 | 8568732 | T | A |
| Osa01LNT0011700.1 | 1 | 8569310 | C | T |
| Osa01LNT0011700.1 | 1 | 8564628 | A | G |
| Osa01LNT0011700.1 | 1 | 8565860 | A | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0011700.1 | osa-miR5532 | Cleavage | 5.0 | 15.827 | 1 | 22 |
| Osa01LNT0011700.1 | osa-miR5797 | Cleavage | 5.0 | 11.57 | 1 | 21 |
| Osa01LNT0011700.1 | osa-miR1437b-5p | Cleavage | 5.0 | 15.891 | 1 | 21 |
| Osa01LNT0011700.1 | osa-miR156b-3p | Translation | 5.0 | 16.579 | 1 | 21 |
| Osa01LNT0011700.1 | osa-miR160c-3p | Translation | 5.0 | 19.709 | 1 | 21 |
| Osa01LNT0011700.1 | osa-miR169i-5p.2 | Cleavage | 5.0 | 14.651 | 1 | 22 |
| Osa01LNT0011700.1 | osa-miR1428a-5p | Cleavage | 4.5 | 15.443 | 1 | 21 |
| Osa01LNT0011700.1 | osa-miR810b.1 | Translation | 5.0 | 12.751 | 1 | 21 |
| Osa01LNT0011700.1 | osa-miR1441 | Translation | 3.5 | 24.582 | 1 | 21 |
| Osa01LNT0011700.1 | osa-miR1847.1 | Cleavage | 4.5 | 15.178 | 1 | 21 |
| Osa01LNT0011700.1 | osa-miR1852 | Cleavage | 4.5 | 21.014 | 1 | 21 |
| Osa01LNT0011700.1 | osa-miR1854-5p | Cleavage | 4.0 | 11.959 | 1 | 21 |
| Osa01LNT0011700.1 | osa-miR1856 | Cleavage | 5.0 | 20.892 | 1 | 21 |
| Osa01LNT0011700.1 | osa-miR1861n | Cleavage | 4.5 | 17.964 | 1 | 22 |
| Osa01LNT0011700.1 | osa-miR1865-3p | Translation | 5.0 | 17.856 | 1 | 24 |
| Osa01LNT0011700.1 | osa-miR1870-5p | Cleavage | 4.0 | 14.45 | 1 | 24 |
| Osa01LNT0011700.1 | osa-miR2879 | Cleavage | 5.0 | 11.298 | 1 | 24 |
| Osa01LNT0011700.1 | osa-miR5488 | Translation | 3.5 | 16.514 | 1 | 21 |
| Osa01LNT0011700.1 | osa-miR5523 | Cleavage | 5.0 | 15.832 | 1 | 22 |
| Osa01LNT0011700.1 | osa-miR5523 | Translation | 4.5 | 12.085 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0011700.1 | 1 | An9 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0011700.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0011700.1 | 1 | nan | Morphological trait | Root | RM7383 | RM23 |
| Osa01LNT0011700.1 | 1 | nan | Resistance or Tolerance | Insect resistance | RM576 | RM3412 |
| Osa01LNT0011700.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0011700.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0011700.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0011700.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)