© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa02LNT0147000.1
AGCTAGTGCGCACTCGCATCAGGATTAGTTGAATGATCTGATACAAAGTCTTGCATGGGCAATCTTTCTTTGCATGGTATCAGTGCTGTGAGATGCTACCACGTCCATATAATTTCCTATCTGCCTGGTAATGCAGAGTTGCTCATGGACTGTTACAGTGTTAAAGGCTGGGATTGCCCATAAATTTGCCAGCCAGAAATGAAATTTCTCTACTTACAAACATCACGGGCCTAGATTTAGGATTTAGGATGCATGTTTAAATGCATCATATCCCTGTGACATACAAGCTTGCTGCAAAGACGATGTCACGCTTAATGGCATTGGACGCAGTCTCCATTTTCTTATGCAACGCGGAGTTCCCCATTATGGAAGCTGCATTCCTGAACTCCCTGCAAGTTTCATCCAACCGCACGATTGTTCTTACAATGAGACCTTCAGATACATCTGTCAGCTCACAGATGTCTGCAAATGGGGTCCCCTTTGCCCATTCGTAGACGACTTCAACAAGACCGAACTTGAGATTATCACGGGCATATTCCTCGGGATCTACAGGCACCTTGAACTCTCTCTGGAGCTTTCCTAATCTGATTGCTGTATCATAAATCCTCTTTCTGGCATCTGCTAGTTTCGGGGTAAGAGATGGTTCTGATGTATTCCTTTGTTGGAAGACCAATGCAGACATAATAGCTACGGCTTCTTCAGGTTCTAGGTCATCCAACTGATTCTCAAACAGACATTCGGTTGATATCAACTCCTCGCCGGAATTCATTTCGCAGGCCACTCGGCCCTTAAGTTGCACCACTAGATCAGAATCAATGTAATGGATTTCTTTTAGTACATCGATTCTGCCTTGAAACTCCGGCATCTGTTGAAGTGCCTCATCTGACATTTCATATTTCAAATCATTCAGCTGATCCTTGTACACCTTTTGCTCCTTCATCAATGCAATATGCTCCTTTAATTTTATACAACCATGGCACTTATTTTCAGACATTTTTTGCAGTAATCTCTGGTAAGCATAGTAGTTCTCAACGAGAAGCATGTCTTTCATTTTTAGATCTTTTATTGCATCTAAAGCAGCAGGATACTTGTTTCCGTCTGGTTGCTCTTTTATAAGCATCTGGACAGTTTTAGAGTAAACTGTTTTGCTTGGATCCTCAAGGAGTCTGACTTGATCAATCTTTATTTTGCTGGCGCATATATTCATAATCTCTTTATTCTCTATTGCTCTAACTTCAAAACCCATTCCAGATGCATCTCCCTTGTATGGTAGCTTGATATTGATGACACCTGAACCTTTCCGTGTACTGACAGAAGAGAAATATTCATCTTCCATGCTACGTTTTCCTTTCGGGATAACAAAGTATCCTTGTTTAAAATCCCCTGCTTCCTTTTCATTCTGGTTGGATGAATCAGGAGCTAGTGCTGACGATGTGCAATCACCGGTCAGTACAAGAACAACATATTGCTTTAGTGCAGCAGATGGAGTTTTCACAATTACACCGAGCAAGTGATCATCATCTGATTGGGATTTAACAACAACCAGACGGCCAGGTGTAAGGGACTGTTGAGAAGCAGGCAACTGCATAATTGCTTCCGTAATAGACTCCCTGTGTGCCTCAGCTTCTAAGACCATCTCGTAGTATTCTTCAATAGCCGGCTCTCCTTTTATGCACTCAATTGTCTTCGTGGGTTGACGAAGCATCTGCAGAAGCAACTTTTCCTTCTCAGGCAAATTCTTTTGTGCATGGAATTCTGCAAAACTTCTCTTTAGCATGTCCTCCACCTTGAGTTCCTCCACACGTAGAAGATGCAGTATCATAGTGTATGTTAACCGAAATTGAGATTCTAGTCGAGTTGGTTTTCCAACAATCAAATTCTTCAAATCACTTTCTTCGGGAATTTCATCACGACACATAACGATCACTGTACCAATGTTATCAAGCCCTCTCCTACCAGCTCGCCCGGCCATTTGAATATACTCCCCTGGAAGTAACTTCCGATGTTCTTTTCCATCAAACTTTCTTAAGGAATCAAACACGACCGTCCTTGCTGGAGCATTAACGCCCATCGCAAATGTCTCAGTGGAAAATAACACCTTGATGACGCCACGACAAAACAGCATTTCAACAACTTCTTTGACGATAGGAAGAAGTCCAGCATGGTGTACTCCAATCCCTCTACGTAGAAGGCTTTGTATCCCTACAACCTGTGGAAGGTTCCTATCAGATCCTTTAAGGCGTGAAAAGGCCTTGTCACAGAAGAGGCGGATTTCACTTTTCTCTGAGTTACTGGTGAGATCTGCACCAAACATGCTCTCTGCTGATCTATCACATCGATTTTTTGAGAAGCAAAAAATTACCACAGGCACGAGGGATTTCTTCAGAAGGTTATTTATGAGGGGCATCCAGAATGAAGACTCTGATCTCCGTGGCCCAGAGGTGCTTTGCTGAACAGCAGCAGCTGATGAGCTGGCATGATGGTGCTTTGGATTTTTCTGATCTCTACCTCTACTAGATGTATCTGGATTTCTGCCTTGAGTTCCAGCACGTACTGCAGTTGTTCCTGGTTTTGAACCAGGTTTCATTCCAAGCTTGCTCGAATTTTTCTTTTTAAAAACCTCCTTGGCTTCTCTATATCCTTGAGTAAGAAATGCATCCTTCTCACATATTTTGAACACTTCTCCGGAGTAGAACAAACAGTGCTCCAGGGGAACAGGCCTTTTGTTGGTCGATGTGACATGAATTTTCTTCTGCTTTGTTCGACCAATCCAGTCAGCAAATTCAACTGTGTTTGGAACCGTTGCCGAAAGAAGGACAATGTTGATGTGCTTCGGGAGCATTATAATAACTTCCTCCCAAACTACACCTCTCTCTGCATCATTTACATAATGCACTTCATCAAAAATTACCCATTCAATATCACGTATGATGTCAGCACCTCTGTAGAGCATTGAACGTAATATTTCTGTGGTCATAATTAAGCAAGTTGCCTCTGGTCTGATACTGACATCTCCTGTGAGAAGTCCCACGTCAAACTTCCCACAGAAATCTCGGTATTTTTGATTGCTGATAGTTTTAATGGGAGCAGTATAGACAGCCCGGGTGCAATGTTTTGTTGCTAAAGCGAATGCATACTCTGCAACAACCGTCTTTCCTGCTGATGTATGAGCTGCCACAAAGACTGATTCACCCTTCTGAAGATAATATATAGCCTCCTTCTGGAATTTGTCTAGTTCAAATGGATACTCAATTGCCATATCTGGAACAAGTTTATAGAAGTTAGTCACAATGTCTTCATCCCCACCAACAAGTGCCCAAACCTTGCCCTCCTTTGCCATGCTGCCATCACCTGACCCACTTGAATCTCTGCTAGTATCTTTAACTGAGGACAATAACATTTGATCCAAGTCTGATTGAGGTTCAGAAACATCTCCTTGGGCACCACCTTTCTGTTTTTCAATGTCCAGATTTTCTATAGTTTCAGAAGCATTTTGCAGTTTGCTAATATTTTGTTTATCAACATCATTGGTCTCCTCATCTCCAACCAATTGCTGAACATGATCTTCACGCGGCACCTTGTCGTCAGAATCTTCCTCCCATGCTATCTTGAATAGATCATCAAACTGCACTGAGTACTTATCCATGGTGTCATTTGATGAAGATGTGGATTGCTCATCTACACGCTCTCCATCCTGGTAACACTTCCAATGGCTTTTGTACTCCTTCAAATTGCCCAGGTCCAATCCCTTGCGGAATCCTGGAGGATTAACCTGAGCTGGCCCTCCGCTCATAAGCTCGCGCACCCAATCCCCATTGCGTGCACCCTCTGGAAATGCCTTCTCCAAAGCAGCAGCCGCAGCCGCATCATCATGCAGGCCCCCTGGGCGGAACGGGCGGCTGTTCACGCTCCCCCTCACGAAATCCTTCGCAGGGCCAGGCATCCGCGGCGTTATCCCACCGGTGCCCGAATCAAACACGTCGCTCATATCCATCTGCACGGACTCAGGATCCCACACTTGCGACTCCTGCCGCGACGACGACGACGACAATGGCGGCCGTCGGCGGCGGAAGGGCGGCTCCCAGGCGGGCACGAGCATGGTGCGCGGGGCGGAGGGCTCCAGCGGCGGCCTAGCCAACTCGAACCAATCCAAATCCCACACCCTCGCGCCATCGGCCGCGGTGGGGAGGTGGAGCTCCGGGTTGAGGTAGTTGGCCTCGAGGTACTCCTTCACGCTGCTCGGGCTCTCCAGCGGGTACGCCGGCGGCAGGACGAACTCGGGTATAGGGCTGGGCGGATTGGGCGTGGGGTCGAGGCGGAGGTGGCCGCCATGGCCGGAGAAGCTGACGCGGAACGGCACCTCGCTCGCCGGCGACGAGGTGGTGAGGTCGCCCATGGAGGCCGCCGCCGGTGAGGAGGCGGTCCGTTTCCCTTTTCGACGGAAGACGAACTGGTGCTTTGGGGAGTTTCAGCTTTACCCGCAGAAACAATAGAAGAAATTGGACGTTCG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa02LNT0147000.1 | 2 | 3237710 | A | C |
| Osa02LNT0147000.1 | 2 | 3238319 | T | G |
| Osa02LNT0147000.1 | 2 | 3238396 | A | T |
| Osa02LNT0147000.1 | 2 | 3238881 | A | T |
| Osa02LNT0147000.1 | 2 | 3239642 | C | T |
| Osa02LNT0147000.1 | 2 | 3239714 | C | T |
| Osa02LNT0147000.1 | 2 | 3240199 | A | G |
| Osa02LNT0147000.1 | 2 | 3241474 | C | T |
| Osa02LNT0147000.1 | 2 | 3241737 | G | C |
| Osa02LNT0147000.1 | 2 | 3242162 | A | C |
| Osa02LNT0147000.1 | 2 | 3242420 | C | T |
| Osa02LNT0147000.1 | 2 | 3242653 | A | G |
| Osa02LNT0147000.1 | 2 | 3243213 | A | C |
| Osa02LNT0147000.1 | 2 | 3244441 | T | C |
| Osa02LNT0147000.1 | 2 | 3244642 | T | C |
| Osa02LNT0147000.1 | 2 | 3244700 | A | G |
| Osa02LNT0147000.1 | 2 | 3244750 | A | T |
| Osa02LNT0147000.1 | 2 | 3244975 | A | G |
| Osa02LNT0147000.1 | 2 | 3245888 | G | A |
| Osa02LNT0147000.1 | 2 | 3247180 | T | A |
| Osa02LNT0147000.1 | 2 | 3247269 | C | T |
| Osa02LNT0147000.1 | 2 | 3247967 | C | T |
| Osa02LNT0147000.1 | 2 | 3248947 | C | T |
| Osa02LNT0147000.1 | 2 | 3249842 | A | G |
| Osa02LNT0147000.1 | 2 | 3246786 | A | G |
| Osa02LNT0147000.1 | 2 | 3245499 | C | T |
| Osa02LNT0147000.1 | 2 | 3239215 | A | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa02LNT0147000.1 | osa-miR5528 | Cleavage | 4.5 | 11.873 | 1 | 21 |
| Osa02LNT0147000.1 | osa-miR5541 | Translation | 5.0 | 19.669 | 1 | 21 |
| Osa02LNT0147000.1 | osa-miR5795 | Translation | 5.0 | 12.68 | 1 | 22 |
| Osa02LNT0147000.1 | osa-miR2873c | Cleavage | 4.0 | 16.442 | 1 | 21 |
| Osa02LNT0147000.1 | osa-miR6252 | Cleavage | 4.5 | 19.263 | 1 | 23 |
| Osa02LNT0147000.1 | osa-miR6252 | Translation | 5.0 | 19.555 | 1 | 23 |
| Osa02LNT0147000.1 | osa-miR1861o | Cleavage | 5.0 | 15.268 | 1 | 22 |
| Osa02LNT0147000.1 | osa-miR166a-5p | Cleavage | 3.5 | 17.904 | 1 | 21 |
| Osa02LNT0147000.1 | osa-miR166e-5p | Cleavage | 3.5 | 17.904 | 1 | 21 |
| Osa02LNT0147000.1 | osa-miR160f-3p | Translation | 5.0 | 9.405 | 1 | 21 |
| Osa02LNT0147000.1 | osa-miR166g-5p | Cleavage | 4.5 | 19.106 | 1 | 21 |
| Osa02LNT0147000.1 | osa-miR530-5p | Translation | 4.5 | 24.644 | 1 | 20 |
| Osa02LNT0147000.1 | osa-miR817 | Cleavage | 4.0 | 23.273 | 1 | 21 |
| Osa02LNT0147000.1 | osa-miR1861a | Cleavage | 5.0 | 15.268 | 1 | 22 |
| Osa02LNT0147000.1 | osa-miR1863a | Cleavage | 3.5 | 22.24 | 1 | 24 |
| Osa02LNT0147000.1 | osa-miR1866-5p | Cleavage | 5.0 | 14.426 | 1 | 24 |
| Osa02LNT0147000.1 | osa-miR1882a | Cleavage | 3.5 | 18.723 | 1 | 24 |
| Osa02LNT0147000.1 | osa-miR1882b | Cleavage | 3.5 | 18.723 | 1 | 24 |
| Osa02LNT0147000.1 | osa-miR1882c | Cleavage | 3.5 | 18.723 | 1 | 24 |
| Osa02LNT0147000.1 | osa-miR1882d | Cleavage | 3.5 | 18.723 | 1 | 24 |
| Osa02LNT0147000.1 | osa-miR1882e-5p | Cleavage | 3.5 | 18.723 | 1 | 24 |
| Osa02LNT0147000.1 | osa-miR1882f | Cleavage | 3.5 | 18.723 | 1 | 24 |
| Osa02LNT0147000.1 | osa-miR1882g | Cleavage | 3.5 | 18.723 | 1 | 24 |
| Osa02LNT0147000.1 | osa-miR1882h | Cleavage | 3.5 | 18.723 | 1 | 24 |
| Osa02LNT0147000.1 | osa-miR2055 | Cleavage | 5.0 | 11.132 | 1 | 21 |
| Osa02LNT0147000.1 | osa-miR2122 | Cleavage | 3.0 | 18.669 | 1 | 22 |
| Osa02LNT0147000.1 | osa-miR2865 | Cleavage | 4.5 | 19.024 | 1 | 22 |
| Osa02LNT0147000.1 | osa-miR2873a | Translation | 3.5 | 16.712 | 1 | 24 |
| Osa02LNT0147000.1 | osa-miR1863b | Cleavage | 3.0 | 22.24 | 1 | 24 |
| Osa02LNT0147000.1 | osa-miR5505 | Cleavage | 4.5 | 14.868 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa02LNT0147000.1 | 2 | S29(t) | Physiological trait | Sterility | nan | nan |
| Osa02LNT0147000.1 | 2 | qWIJ-2 | Morphological trait | Seed | RM233A | RM8 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)