>Osa02LNT0147400.1

AAGAGAGCTAATCTCCTATATGGTCTTAGCTACCGGGATCTATACCCTGCAACTGTCATCAGCTGGGCATGAAGAACAGCAGGCGGCCAGCTATATTTATTTCAGCTTAATTCTCAAAGGGTATATATACTTTGGTGAAGATCGATCGGTGCATGGTTGATTAGAGAGCCAACTGAATGGGATTTCGCTCAGTTTGATCCTCATCACAGTAGGTGCTTAATTGTTTGTTTTTCATGGGATGAAGGAGGGAGTATGAAAAGCTGGCTTGCTTAATTGTGCACCATGCAGATCAAGAGCAGGGAATGCAAGAAAATGCAGCATATGGTATGTAAAATGCACGATGCTGGTGAGTAATGTTTTAATGCCCCTTATTTGTTACTTTGGTTAATTAATTTCTACTTAATTTTATCCAGTTTTGCCTGATCAGTACCCTACTTTAATTGTTTCACTATATAATTTGCACCCGGTTATTACTATATTGTTGTAGTGTGTCTATCTTACCATTAATAAGATACTCCCTCCGTCCCTAAATATTTGACGCCGTTGACTTTTTTAAACATATTTGAC

Explanation	CPC Score
noncoding	-1.2012

Transcript ID	Chromosome	Locus	Ref	Alt
Osa02LNT0147400.1	2	3558194	T	C
Osa02LNT0147400.1	2	3557552	G	A

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa02LNT0147400.1	osa-miR6248	Cleavage	3.5	9.137	1	21
Osa02LNT0147400.1	osa-miR1436	Cleavage	4.5	9.335	1	21
Osa02LNT0147400.1	osa-miR1439	Cleavage	4.0	8.676	1	21
Osa02LNT0147400.1	osa-miR2877	Cleavage	5.0	21.993	1	24
Osa02LNT0147400.1	osa-miR395x	Translation	4.5	6.14	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa02LNT0147400.1	2	S29(t)	Physiological trait	Sterility	nan	nan
Osa02LNT0147400.1	2	qWIJ-2	Morphological trait	Seed	RM233A	RM8

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus