>Osa02LNT0147800.2

CATTTTGGGATCTTTCCCTCTTCTTTTTTTTTTTTACTGAAACAGGCCTTCAGAAAAGGAGATGAACAAACAGCATTTCACTGTACATAAGCTTACAAAGTTTGCTCCCGAGTTACAACTTACAGCATCAGCAATGACAGAAAATGAGCGAAGTGAAATGAAGTTACAGCTGCTACTAGATTGAGTGAGAAGAACAATGGCAGGTACAATTCCAAGAATTGCCATAGGCTATCTACCTACTTAGAACAGCCAGTGCTTCTTTCTGGTCTTGCGATTTGGAAGATCTTCAGTTGCATACAAGGAATTGTAGTGCACCTCACTCCAGAAGCTTAACCAAAGCTCTTTTGTGGGAGTGGCACCTCTGGGGACTATCTCGATTAGGCATGTGTCTCTAAATGATGTCAGCAGGCAAATCTTGGCAGCAAACCGGTCTGCAGCCGCTTGTAAGGTCACATGATCTCCCCATTCTCCAGATCTTTTCATTTTCTTCAAGTACACCTTATATTCCATCGGTACATAGCCTTCATAGTGTTTCCTGAATTCCTTTAGCTGCTTCACGACTGACTTCCTCACATGTTTGTGATAGTCAGGATTGCGGAATATCTGATCTGCCAAAGCTCGGAACTGACAATTTCCGTCTCCTTCAATTTGGAATTCAGCTAAGCCATAAGTGCCCAATCTTTCCAGTAATGTTTCATGGTCTATTGTTGCATTATTAACATCAGGAATTTGCCCATTAACTCGAGGAGTGTGCGGGATAGAATCTAAGTGGGAAAGGCGTTTTCCAAGACTCCGTCCACTGTTCTTTGCTTCAGTTAAAAGGGTACCAACTGTCACATCCTCCTCACTCTCCTGAGTACTGGTGCTAAGACTTGAGCAAGAACTTTTGCTAGCATGATCCTGTTGTTCAGACATGCTACCTCAGAGGGAGCATTGAAAATATATGGATTGGCTGCAGGTTCCAAAGGAAAGAATCAGTGCAATCCAACTTCAGGTGGCTATCCCGCACCTTGCTGGTTCTTGCCGGCCGCGCGCGGGAGGAGGAGGAGCTCTGGCTCGCGCAGCAGCAGATCGGCAGCAGAGAGGAGAGGAGAGGAGCGCGATGGAGAAGAAGATGCG

Explanation	CPC Score
noncoding	-1.11796

Transcript ID	Chromosome	Locus	Ref	Alt
Osa02LNT0147800.2	2	3708550	G	A
Osa02LNT0147800.2	2	3707938	T	A
Osa02LNT0147800.2	2	3709616	A	C
Osa02LNT0147800.2	2	3709640	G	C
Osa02LNT0147800.2	2	3709722	T	C
Osa02LNT0147800.2	2	3707961	A	G

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa02LNT0147800.2	osa-miR5836	Translation	5.0	18.474	1	21
Osa02LNT0147800.2	osa-miR395b	Translation	5.0	18.104	1	21
Osa02LNT0147800.2	osa-miR395d	Translation	5.0	18.104	1	21
Osa02LNT0147800.2	osa-miR395e	Translation	5.0	18.104	1	21
Osa02LNT0147800.2	osa-miR395g	Translation	5.0	18.104	1	21
Osa02LNT0147800.2	osa-miR395h	Translation	5.0	18.104	1	21
Osa02LNT0147800.2	osa-miR395i	Translation	5.0	18.104	1	21
Osa02LNT0147800.2	osa-miR395j	Translation	5.0	18.104	1	21
Osa02LNT0147800.2	osa-miR395k	Translation	5.0	18.104	1	21
Osa02LNT0147800.2	osa-miR395l	Translation	5.0	18.104	1	21
Osa02LNT0147800.2	osa-miR395s	Translation	5.0	18.104	1	21
Osa02LNT0147800.2	osa-miR395c	Translation	4.5	18.104	1	21
Osa02LNT0147800.2	osa-miR395a	Translation	5.0	18.104	1	21
Osa02LNT0147800.2	osa-miR395u	Translation	4.5	18.104	1	21
Osa02LNT0147800.2	osa-miR395m	Translation	5.0	18.104	1	21
Osa02LNT0147800.2	osa-miR395n	Translation	5.0	18.104	1	21
Osa02LNT0147800.2	osa-miR395p	Translation	5.0	18.104	1	21
Osa02LNT0147800.2	osa-miR395q	Translation	5.0	18.104	1	21
Osa02LNT0147800.2	osa-miR395v	Translation	5.0	18.104	1	21
Osa02LNT0147800.2	osa-miR395r	Translation	5.0	18.104	1	21
Osa02LNT0147800.2	osa-miR2919	Cleavage	3.5	14.329	1	19
Osa02LNT0147800.2	osa-miR395y	Translation	5.0	18.104	1	21
Osa02LNT0147800.2	osa-miR5505	Cleavage	5.0	12.975	1	22

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa02LNT0147800.2	2	S29(t)	Physiological trait	Sterility	nan	nan
Osa02LNT0147800.2	2	qWIJ-2	Morphological trait	Seed	RM233A	RM8

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus