>Osa02LNT0148100.1

GAGATGTATAATGAGCCATAAGCAATATGCCTGAAAATTTTACATTCTCTAGTCTGTAATGAAGAACTAACAATCCTCCATGAAACATTTTTCCTAAAACAGTAGTCTTATGTAATTGAACCTTTTTCCTTTTTAATTTTGTTTGAGTCAATTCCTTTTGGGTATCTATATATCAAAAGTGATTTTTATAACATACCGGTATGCAGAAAAAAAAAGGCCGTTAATATATTTAGTACAGAAAAGCAAAATATATGGACAGAAGAAGAGGAGGGCATAGCTCTGTGAGCACCCAGTGGGGATCAACCACAGTTGAAAACTGGAACACGAGCAGGGTATCAAATGACCAAATATGTACAAATGGAATCCAAGCAAGCCCGTTGCTAGTTAGCGTTGAATCCTTTGAGTGGGAGCCTTCACCAAACAAAGACATAAGGGCACATCAGGACAACTTTTACAAAATACAACAGCTTGCTTGTTCCTTCTTTGGATCTTGGTATAGTCTTAAGGCCTCCAGGAATTTGTTCCAAAATGGGCCAGTCTCCTGAAGGCTAACGTTTTCTGGTCCCCCAAGGTATGCCTGAACAATGAACTCGTGACTTCTTTCTCTTCCTTCATATTGTGACAACCATCCCAAGTAAGCTGCGCCAAAGTACATTGATGTAAAAGGATTGTATAGATCATCTACGGAGCTGACAGTATACGCCCTATGGCCACAATCTCTGTAAAGCCATGCTGCAGTAGGGTAGTCTATTCCCATCAAGCCAGTACGAGAACGAACACCATGGACAAAACGCATACTGCACACCTCAGCAAGAGCAGCTAGGGCTTCTGGTGTTACTCCTTTTGAGCTCAAATGACGTGATATGGTTATTTCAGCAACAGCCTTCACCTCAACTCGAGAAAGATAAGGCCTCCTCTTGGAGTCATGAGAAAACCTCACATTTCCTCGCCTCTCACCAGATTTTGTCCACTCCTTAATCACATCGGGCTGACTCCACATCGCATCCATATCTACCTCTGATACCTTGGAATCCCAATAAATCAACTGTCCTTCTGTGCTCGAGGAATTGGCTAGGAGATTAGGAGTTAAATCATTAAAACTTTCTGGCTGTCTCATAGACAGCAAGGCCTCCTTCACATAAAGATAGCGTTGAAAGATGGGGGAAGTTGATTTGTGAACAGCCTTCTTTTTGCCTCCCTTGTAAGCTCTAACAACGAATTCTTCAGTTCTTTCTTTATCGTCACATGAGAATAGCCATTTTGCATAAGCAGCACCAAAGTAGACATTCACAAAAGGCCAATAGAGCAAATTAGCATCTTCTTCAATGTCATAATACTTGTAACCCAATTCCCTGCCAAGCCATTGAGCAACTTCTATTGTCACCTGCATTATGCCAGCTTTGATCTCCTTAGTCTTTCGGTCATAATTATCGACAAAGAGTCTCCTTCCACTTGCAATTTCTGCAAGGGCACCTATCATATACGGGTCTAGCTGTGACTTGAAATGCTTATGAACAGTAATTGCAGCCACCGCCATCATTTCAGTTTGTGTGAGATATGCCTCACCATCAGGATCCCGTGACAGGTGAACCTTCTGTCCCGGCCCTTCCCCAGCATCAATCCACTCTTTACTTACATGAGGATCAGCCCACATTAATTGCATATCCTCTGGATCCAAGCAGTCATCCCAATATTTGAAGCTTATAGCCATTTTGTACTAATTAGCAATTGTATCTGTCGATCTACACGGCGCGCGGGATTGGGAGACGATTCGGAGGATTGGATTCCTCTCGCGTCGACGGGGGATTTGGTTTTGGGAGGGAATGGCGGGTTGGTGCGTGCGTTGGTGGAATGGGGAATTGAGGAGAGAGAGAGAGGGAAGGGAAGGAGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGCGCGTATTG

Explanation	CPC Score
noncoding	-1.23096

Transcript ID	Chromosome	Locus	Ref	Alt
Osa02LNT0148100.1	2	3856504	A	G
Osa02LNT0148100.1	2	3856815	A	G
Osa02LNT0148100.1	2	3856012	A	C
Osa02LNT0148100.1	2	3857408	G	A
Osa02LNT0148100.1	2	3857907	T	G
Osa02LNT0148100.1	2	3858289	T	G
Osa02LNT0148100.1	2	3858967	G	C
Osa02LNT0148100.1	2	3859592	T	A
Osa02LNT0148100.1	2	3862029	T	C
Osa02LNT0148100.1	2	3862491	A	C
Osa02LNT0148100.1	2	3863081	T	A
Osa02LNT0148100.1	2	3859997	T	C
Osa02LNT0148100.1	2	3858710	C	A
Osa02LNT0148100.1	2	3859861	A	G

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa02LNT0148100.1	osa-miR7692-5p	Translation	4.5	12.297	1	24
Osa02LNT0148100.1	osa-miR156f-3p	Translation	4.0	16.118	1	22
Osa02LNT0148100.1	osa-miR156h-3p	Translation	4.0	16.118	1	22
Osa02LNT0148100.1	osa-miR156l-3p	Translation	4.0	16.118	1	22
Osa02LNT0148100.1	osa-miR172b	Cleavage	5.0	23.184	1	21
Osa02LNT0148100.1	osa-miR390-5p	Cleavage	4.5	22.815	1	21
Osa02LNT0148100.1	osa-miR529a	Translation	4.0	17.228	1	20
Osa02LNT0148100.1	osa-miR1425-5p	Cleavage	4.5	21.807	1	21
Osa02LNT0148100.1	osa-miR1862a	Cleavage	4.0	24.178	1	24
Osa02LNT0148100.1	osa-miR1862e	Translation	5.0	21.071	1	24
Osa02LNT0148100.1	osa-miR2094-3p	Translation	4.5	17.968	1	22
Osa02LNT0148100.1	osa-miR1862f	Cleavage	4.0	24.178	1	20
Osa02LNT0148100.1	osa-miR1862g	Cleavage	4.0	24.178	1	20
Osa02LNT0148100.1	osa-miR3979-5p	Translation	4.5	7.149	1	20
Osa02LNT0148100.1	osa-miR5508	Translation	4.5	10.417	1	21
Osa02LNT0148100.1	osa-miR1862b	Cleavage	4.0	24.178	1	24
Osa02LNT0148100.1	osa-miR1862c	Cleavage	4.0	24.178	1	24

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa02LNT0148100.1	2	qWIJ-2	Morphological trait	Seed	RM233A	RM8

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus