© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa02LNT0148500.3
GGTCGATTAAAGTTGGACGCAAAAACTCATAGTTGCGCTTATTTTAGGACGGAGGTAGCAAGAGAAGCTCTGCAAAATGCCAAACCCGGCTGTTCTGATAGGACGGGCCCACACGACCCGGAAAACCGAGACCAGCCACAAAAACGGGAGATGCCATCCATCCGTCCTTCCGGTTCGATGCATCGGGTCACCTTCCTCCAGCAACAAGCCAACAACGACAAGTCTCGACGAGATTCATGCACGATGAAGTCACGCGTGCGATGAGAAAACCGCACGCGTGTCTGTAGCATGGCAAAACCAGGGATGCGCCACTTGTGCCGCTGCGACTTGAAGCTCACTCGCATAGTACATTCGGTTACTTCCATGTTGCTTTCAGGCCAAAGAGAGTACACGTTTGGTTCAAATTCAACCCGTTATAACTTGGGAGTTGCTTCCTGCGATGTCACGCATGATCTGCCCGCCATGATTCTGCAGGATCAGTAAAGATCCCACTATTCAGCAACCAACTAAATGAGATCCTTTTCCCTGCAGGAGGAGAATGTGCATGTCCAGTTTCACAGAAGAAAGCATATGAATGTCGAGAGGGTTCATCCGCCTCTGAACAACACCTCTACACCAGTATACTTTCTAAAATCACAAAAACCACATGGAGTTAATCAAACAAAATAAACGATTTCTGAACGAGCTTTGAGAGAGATACAGCAATCAGATATGCTAACACCATATGAACATCGCTAATTTTAATGTAATAAAATAATCAAAATTAGAATGGATTATAAGATATACATGCAATTTGATAATGTCTAGGAAGTACAGGAATCTACTTGGCCCATAATGAGAAGGCCCATGTTCCCCTGGCTGTACCACTACCACCTTTCAACAGGTAAATGCGGCTCCAGAATCAACATGTACACTAAAGGACAATGCTGTCCATTATAAATACTGAAAGGATGCTCCACAGAAATGATTGTGTTTCCTCTGAATATTTTTGATAGCTGCGAGAGCTGGCTTCCTAGATGTACGGCCCCACCTTGATCTCTTCGTTACTCTGATTCCTCACTGGTAACACTTATAATCCTAGCTAGGTCTTGGACAATCTCTGACATTGATGGTCTGAATTCTGGTTCCGGCCGAATACAACGGCTGATGATGTCTGCAAAACGTGACAGTACTTTCTCAGAACACTCTCCTTGAATAGAAGGATCAACCATCTTTGATATGGACTCAATGTCATGAAATTGAGAATCAGCCCATCTAACAAGATGTTGTTCAGCACGAGGACGAGAACTGTCATATGGTTTACGGCCAGTGAGAAGTTCTAGCATTACCACGCCAAAACTGTAAACATCACTTCGGTAGGTAAAAGTCCCAGCTTCATGGATTTCAGGAGCTTCATAATTCAGCAGTGCCCTCATGCGACCTGACAACTGTGTAACAGAACCTGACAGCGTCAATTCTGCCAGTCCACATTCAGCGACACGTACTGAGAATCCATTACCAAGGAGCACATTGGCTGGCTCAAAATTCTGGTGCACTACTGGAGGTTCACAGCTCTCATGTAGATAGTCTAAGGCCTTTGCTGCACCAAGAGCAACTTGGAGGCGAGCATTCCATGATAGTGCACCATCCAATTCCTCCCCTTCATGTAGTACATCATGCAGTGTTTTTCTACTGAAATGATTATAAACAAGTAACCTCTGACCATATTCTGCACAGTATCCAACAAGCTCGAGGATGTTGGGATGCCTAATATCTGATACACTTGCAACCAGTTCTAGAAATTCATCTACCGGTATTCTATCATTGGCGTTATCAATCTTCATAACTTCCAAGAACCTGCCTTCAGGAAGTTCTGCCAGATATACTTTTCCCAACCTACTCTCTCTTATCAAATTTCCCTCTTCAAAACTATTTGTATATTGCTGAAGTGATGCAACAGAAAAGGATGTTGCAGATGTCGAGGGACCTGTCCTAGGTGGAGTACTAACTCTTTTCTCTGGCTTAACAATGGGATTTACAATCACTTTTTCAACAGGTGGTGGTGGTGGCGGCGGCGGCGGCGGCCGCGGCGGTGGCGGTGGTGGTGTCGGAGGAGGAGGAGGAGGTGGTGGTGGTGGAGGCGGCGGCGGCGGAGGTGTAGAAGCAAAAATTTCTGTTTCTGATCGCTGCAAGTTAATTACATGTTCTTTTCTCTTTTCAGGAGGCTTCTCGAGAGCAGCTGGTACCGCCAAATTTATTTCACGAACCTGCCTCCGTTCAGGAACCTCTGTTGATCCTTTTTTGGCATCATTCCTTGACTGCACTGAAGCTTGCTTAACTTTCGGCTCTTCAACCCTCTGATGAACCCTCCCCACCTGACTTGTTGTATAATCACGTCTTGACTGTCTCTCTTGGTACTTGGACAGGCAAAATATTACCAGCAGCACTGTAACTATAAACAGGACAATAGCTAGAAGAACATATCCAACAATCCTGAGGGTTGAAGACTTATGTTTCCTAGATGATGGAGAGCTGCTGTCTCGAGCAGTAGATCCACCAGAAGAATTAGAGGGCGAACTAGATGGCGAAGGAGTTCCAGAAGATGAAGGTGACGATGGTGTTTGTGTTGGTGTAGAGCCTGTAGGTGTTGAAGAGGGTGATGCAGAAGGAGCTATGCTGGTATTAAATGGGTTCCCATCCTTTTTGAAGTTTGGCACATTCAGCAACTTTGGAGGAACCGGTCCAGAAAACAAATTATTCTCTATATTTCTGTTTCAGGTAAATATATTATCAGAAACAAGTGTAGATATTTCATATTTGTATGCATAACAGCATTCTAAGAAAAAGGATGATCTGGATTAGACATACATAACAAATTGGATTTAAATTACTGTTTGACTTGTGAATGTCTATGATAAGATAAAAGCTAAATCACTTACATCACCTGTTCTTTTTTCTAACTAGTACAGCTTTGTTAAAACCTAAAAGTCCCGGTTCTGGTCATGACTACATGGTACATTATACTTCTGCAAACAAATGTATGACTGCCATGTACTTTGTGAAAGGATGTCAAGTTTCTACAACCTTATCAAATTCAATGTGACTGTTGAATAATAGAGAACTTTGTGTCTGCTAACATATTGTTGCATGTTACTTCAAAATAATGACAAAGTGCAGGATAATCATAATTTATACTATGACATCTCTAAAGTAGACCAGAAGAAAATGTCTGTTAAGCAGATCAATTTTATAAATCAACACATAACTGAGAATACAATTGCTGATTGTCCAATTTATACATAATGGTGTACTAATAAAAGTGAATCAGTAATATGATGACAGAATAGAGAGTGTGGGAATACAAATCTTTGAGGGGGAGATCCTGCAAGACATCAAGGGTTCCGGATAGTTGGTTGTCTTGCATGTGCAATGTAGTCAATGATGACAGGCTTCCCAGAGAAGGTGGTAATGAACCACTGAAGTTATTGGATGAAATATCAAAATTTACAAGGCCAGTAAGGGAACCAAAAGCATCTGGCAGTTTCCCGTCGAGATGATTATCATTTAGAGACATGTCTGTTAAACTCTGAAGCATTGATAGTGACGTCGGAATGCTTCCAGTGAGCTGGTTATCAGACATAAAAAAATGCTGCAGTGTAACAGGTAGATCTTCTGGTATAGTTCCACCAATATTGTTGTTGCTAAGATTTATAGTGGTTATTGAAGTGAAGTTCCCCAGGCTGCCTAACTGTCCTTCCAAATTTGCAGCATTGAAAATTAACGCCCTGCCAACCATCACCACAGGGGTCACCACCATTCGCAGTCCATTTAGGAAGAGCCGGTGATCCAAGTGCAACATACAGTCCATTTATAGCAGCAACATCGGCGGCGACGGTGGCCGCGAGCGCCCGCCGGGGCAATGCCGCCGCGGCGATCAGCAGCAGCAGCGGCAGCACGAGCACCGCCGCGGGAGCCCCTCTCCGGAAGCAGCACCTCCCTCCCGCTGCCATCCGCATCGACGCAAACTCTCTCTCTCTCTCTCCCCTCCAGCAATTAATCAGCGCGGCCTCCGCCGAAGCAGCATCAGCCAGATCAACCCGAAGCGATCGCGGAAGAAGAAGGAACCAAACCCCGCGTTCGCAGATCTAGCGTTCGCTCGCTCGCGCGCTCGCGAGAGAGAGATGCCGTGCCGTGCTCCGCACCACCGCCGCCACCACGGGGCTCGCTTCCCGGAGCACGCCGCCGCCGCCGCCGCCGCAGAGGCTTGTGCTTTTGGTGGGCTTCTAGTAGAATCTAGCTGTAAAACTGCAGTCTCCAGAGGAGAGAGAGAGAGAGTGAGAGAGAGAGAGAGAGGAGAGAGAGGAGAGTGAGAGTGGCGGCGAAGTGAGAGAAGAGAATGCGAGGAGGAGGAGCGTGGGAGTGAGCAACGGGCGTGAAAAGGTAGAGAGAGAGAGGGAGAGGGAGTGGGTGAGCGGCGAGCAGCGAGGGGAGAAAGAGAGAGAGAGAAGAAAAGGCGTTTGCG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa02LNT0148500.3 | 2 | 4165420 | A | G |
| Osa02LNT0148500.3 | 2 | 4167490 | T | C |
| Osa02LNT0148500.3 | 2 | 4165387 | A | G |
| Osa02LNT0148500.3 | 2 | 4166630 | T | G |
| Osa02LNT0148500.3 | 2 | 4167236 | A | G |
| Osa02LNT0148500.3 | 2 | 4169394 | C | T |
| Osa02LNT0148500.3 | 2 | 4169799 | T | C |
| Osa02LNT0148500.3 | 2 | 4170277 | A | G |
| Osa02LNT0148500.3 | 2 | 4170741 | G | A |
| Osa02LNT0148500.3 | 2 | 4168275 | G | A |
| Osa02LNT0148500.3 | 2 | 4174704 | T | C |
| Osa02LNT0148500.3 | 2 | 4172276 | T | A |
| Osa02LNT0148500.3 | 2 | 4174168 | A | G |
| Osa02LNT0148500.3 | 2 | 4167576 | C | A |
| Osa02LNT0148500.3 | 2 | 4173427 | T | A |
| Osa02LNT0148500.3 | 2 | 4173432 | G | C |
| Osa02LNT0148500.3 | 2 | 4166542 | T | C |
| Osa02LNT0148500.3 | 2 | 4167281 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa02LNT0148500.3 | osa-miR5837.1 | Translation | 4.0 | 15.834 | 1 | 21 |
| Osa02LNT0148500.3 | osa-miR156b-3p | Cleavage | 4.5 | 13.372 | 1 | 21 |
| Osa02LNT0148500.3 | osa-miR156b-3p | Cleavage | 4.0 | 12.978 | 1 | 21 |
| Osa02LNT0148500.3 | osa-miR156b-3p | Cleavage | 5.0 | 7.523 | 1 | 21 |
| Osa02LNT0148500.3 | osa-miR156c-3p | Cleavage | 4.0 | 8.886 | 1 | 22 |
| Osa02LNT0148500.3 | osa-miR156c-3p | Cleavage | 5.0 | 12.978 | 1 | 22 |
| Osa02LNT0148500.3 | osa-miR156g-3p | Cleavage | 4.0 | 8.886 | 1 | 22 |
| Osa02LNT0148500.3 | osa-miR156g-3p | Cleavage | 5.0 | 12.978 | 1 | 22 |
| Osa02LNT0148500.3 | osa-miR396e-5p | Translation | 4.5 | 13.166 | 1 | 21 |
| Osa02LNT0148500.3 | osa-miR1850.2 | Cleavage | 4.0 | 11.361 | 1 | 21 |
| Osa02LNT0148500.3 | osa-miR1850.3 | Cleavage | 5.0 | 16.511 | 1 | 22 |
| Osa02LNT0148500.3 | osa-miR2092-5p | Translation | 4.5 | 14.356 | 1 | 21 |
| Osa02LNT0148500.3 | osa-miR2101-5p | Translation | 5.0 | 19.52 | 1 | 22 |
| Osa02LNT0148500.3 | osa-miR396g | Translation | 4.5 | 13.166 | 1 | 21 |
| Osa02LNT0148500.3 | osa-miR396h | Translation | 4.5 | 13.166 | 1 | 21 |
| Osa02LNT0148500.3 | osa-miR396d | Translation | 4.5 | 13.166 | 1 | 21 |
| Osa02LNT0148500.3 | osa-miR2923 | Cleavage | 5.0 | 15.314 | 1 | 22 |
| Osa02LNT0148500.3 | osa-miR3979-5p | Cleavage | 3.0 | 16.172 | 1 | 20 |
| Osa02LNT0148500.3 | osa-miR3979-5p | Translation | 5.0 | 15.655 | 1 | 20 |
| Osa02LNT0148500.3 | osa-miR812n-5p | Translation | 3.0 | 17.44 | 1 | 24 |
| Osa02LNT0148500.3 | osa-miR5509 | Cleavage | 4.5 | 12.09 | 1 | 21 |
| Osa02LNT0148500.3 | osa-miR1440b | Translation | 4.5 | 9.221 | 1 | 21 |
| Osa02LNT0148500.3 | osa-miR5820 | Cleavage | 4.0 | 12.898 | 1 | 21 |
| Osa02LNT0148500.3 | osa-miR2101-5p | Cleavage | 4.5 | 15.44 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa02LNT0148500.3 | 2 | qWIJ-2 | Morphological trait | Seed | RM233A | RM8 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)