© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa02LNT0148600.3
CTCCAACAAACAAGCTACTATCAAAGTCAAAACAGGCCTATAAAGGATTATATAATTTGCGCCAGAACATACCTAAATAAAAGTACAGCATTCAAGTACAAAATGTATGTTGATCCTGAAAAATATGAGCAGCTCTCAAAAATCAAAAGCAGTAACACTAATAAACCTCCCAGTCATTTAGCTCAAATTTTTAGACATCTCCGTGTAATACTTTGAAAGAAGATGTGCTCAGTAGCGTACTATGATGCATGAATGCGGCCAAGACTGGCCACGGGCCAACCCATAGGTACTAATTGACCCACTCTAGTCCAAATAAACGAACTACATTTCATTTTTTGTGATTCTAAAAGTGAAATTTAGTTCATTTAGTTGAACTAGTGTGGGTAAAAGAGTATCCACGGGTCAGCCCACACTCATCCCTAGCCAACTAGTGAAGTGTATGTCTAAGTTCCTAATCTTTGTTTACATCGGCGTCAGGCCCAATTCATGAGTAAGAGAGGATGAAACATCTGTCGGATTGGCTTCAACCTCAGTATACAGTCAGCCTAAGAGGTAGCATGGTTAGAAGTCAACCTTCAAAATTATACAAGCATCTATGTGCACCACCACTAATTTCAGAGCTGATAATTTTGGTCACTTGGACATGCACAATCACACAGGTGGAGGTGGAGGTGGAGGTGGAGTTGATCCTTCGTTATCTTTCTTTCCCGGTAAACACCTTGAGATGTAAGTTTTCAATTCAGTTCGGGGAACCGGTATGAACTTTCCAGCAAAAGCCAGGGGCCAACTCACAAAACCAATACCAACAGAAACAAGCCAAAGCTTCCAACTGAGTCTCACAGTTGATGTAAATTTCCCAAGAAACTCAATGATTATTACCTGCAGCACGACAGTTATGCTCACTACAGCCAAAAAAAGATGGTTTCTTGAAACCCCATCAAATATATTCAGTTCATATGGTTTACGAGAATTGAACTCGTTAAACACCTGACAAAGCACAAATGTATTAAATATAAATGTATTTTTCACTTTATTGGCATGATCAAGAGTATCTTGAGTCAAATGCAGAAGATCCCGGCCTCTAAAGTTGAGTGTCAGAAGAACAGTAACTTGAAAGACAGCCTGAATGAACAAGTTTCTCCACATAATGTTAGTCACAAGTGGTTCTTTCCGTCCAACAGGTGGCCGCTTCATAAGTTGGTCTGTTGGTGGTTCAGTAGCCAATGCAAGTGCACCAAGTGTGTCCATAATGAGATTGACCCAAAGAAGCTGAACGGCGTTTAGAGGAACATTTCCTGAAGAAATAGCAGCAACCACATTGATTATAAGAGCCGCAACATTTACAGTAAGCTGGAATTGAATAAACTTTTGGATATTTGCATAAACCGAACGACCCCAGCGGACCACCTTTACAACTGAAGCAAAATTGTCATCCAGAATAATTATATCTGAGCTTTCTTTAGCTACTTCTGTTCCTTGGATACCCATAGCAAGACCAATGTCTGCCTCATGCAATGCAGGAGCATCATTCGTTCCATCTCCAGTAACAGCAACAACATTGCCTTTCTTTTTCAGTGCTTTTACTAGGAGAAGTTTGTCACTTGGAGAAGATCTTCCCATGACACTAATCTGATCAGCAACTGCCTCCCTTTCAGCGTCACTGTATGCCCGGAAAACTTTTCCCTCTATTATAACTGGTTGAGATGCCTGGGAGTCCGTGAGTATTCCACACTCAAGTGCTATTGCTCTGGCCGTTTGTAGGTTATCTCCAGTTACCATTCGTACCTTTACACCAGCATTTTTGCACAGATCTACAGCATTTCTTACCCCAGGGCGACAGGGGTCCTTCATCCCTACGATTCCAATGAGAGCCAGTTCATTATCTGGTAATTCCCAGTTGATTCTTTCTTCCTCATTTGGAACATAATTCAGATCAAGATTTCTATAAGCAAAAGCAACACATCGAAGACTTTCCTCGGCCATCTCCTCTATGTATTTCTTGAACTGATTAGCCTTATCAGGTGTCATTTCATGACTAATGCCATTTACATCAAGCCAATTTGTACATAAGGCAAGAACAATTTCAGCAGCCCCTTTCCAGTGCACATGAATATCTGAATCATCCACAATCACTGCAACACCGGCACGTTTCTTTTCTGAGTTGAATGGGGAGACATGAATAATAGAAGATTTTGATTTCTCCTCCGCAAATTTCATATGAAGCTCAACACCCCAAGAAAGAATAGCCTTTTCAGTTGGTGAGCCTGTTATCTCAATAGGACTACCATCCTCTGGCTCAAAAACGCTGCCTGAAGAATTCTGTGCGATTCCTTCAAGTATAAGAGAGGAAACAACAGGCGACAAATTCTCAATATCAGCTGGAGATTTCAGCTTTATCCCCCCAACAACAGATCGGACAACGGTCATCTGATTGAGTGTTAGTGTACCAGTCTTGTCACTACAAATGGTTGTAGCTGAACCCATTGTTTCACAAGCTGAAAGCCTCCGCACCAGAGCTTTGTCTGCCATCATTTTTTGCATCGAATAGGCCAGCGTTAGAGTTACGGCAAGTGGTAGTCCCTCAGGTACAGCAACGACAACAATAGTCACCGCGATAGTTAGTATCTTTATTGTCCCAAAAATTGTAGATTTCACACTTGTTTGCCCCTTAACAAATTGAATAGAGCCATCTGGATTTGTAGTATGCCCTGTAAAATATCTTGCAACAAGGACTATGAGAACCATTGCAGCAACAGAAAGCCCCACAATACCTATGAAAGTTGCCACTCCATTCAACCGTACCTGTAGTGGAGTTTCTTCATTGTTGTCTTCTGAGATGCTGGCCATCAATAAGCCCCACTCAGTGTTTAGACCGACTGCAGTTACCAACATGGTACCATAACCATCAGCTACTTTGCATCCTCCCATTAAGAAAGGTGATTTATGGTCCTTGACAACGATCTTGCTTTCCCCAGTCATACTGGATTCATCAATGGCAAGAGAATGACCACTAACCAAAACACCATCAGCCGGGACCTGGTCACCAATTTTTAGAGCCACTACATCACCAACTACAATATCAAATATTGACACTTCAATCCTTCTACCACCTCTAATAACCTCCACTTGTATATTTTGCTTCTCTTCATTAAGGTGCTGGAACTGAAGGGACTGTTTGTAGTCACTCACAGCAGTAACAAGTATGACAAGAAAGACCGCAAATGCAATGCTTGCACCGTCGTACCATCCTTCTTTGATGCCCTCTGTTGCAATGCCCAATACCAGAGAAATTACAGCCGCTATGATAAGGATAACTAGTGTCAAGTCTTGGCAAGCTTCCCAGAGGAAAACCTGTTAACCCCCGGACCCCAAAGAAAGAAAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGATAGAGAGATAGATAGATAGATAGATAGATAGAGAGAGAGAGAGAGAGAGAGAGAGATATCAGTACTGAAACTAAGACACGCTTACTAGTTGAAATGGACAAATAAATTTACCAAAAAACTTCTCCCCTTTTTGCGAGGGTATCTGTTAGCCCCAAAAGCATTTGCCCTGCATGCCAAATCTACCTCATCTCCATGGACTCCCTTCTCCGTGTTTGTTTTCAGTAAATTTGCGAGTCCTTTAACCCGGATGACTTGAGCATGAGCCCTAATTTTCCTCCTTATTTGTTCCTTTTCCTCCTCTTTCTTCAGATCAAGAGTATATCTGAATCGCCGAGAGGCATTGAGCACAAGAGCAGCTTGCCTCCACCGGCGAAGCCGCTCGACGGAGGCGCGCTTGGCGGGGATGTCGAAGGGGTCGGCCCCCTCGTCCAGCACGTCGACGCCGAGCACGTCGCTGCAGTCGTTGCCGTTGCCATCGTCGTCGTCCCGCCGCCGATGGTACCTCCCCGGCGACGCCTCGGGCGCCTGCACTCCCACCGGCATGATTCCTCAGGAGAGATGACACGGACACCACCAGGCGGCGGCCGCCCCCGATCTGGGGGGCGGCGAGCTGTAGCCGGAGCCGGAGGCGGCGGCGGCGGCGGCGGCGGCGGAGTCGGAGTGGGGGGAGGGGGTGGGGGAGGAGGAGGCGTGCGGCGGAGGAAACGAAGCGAATCGAGGGCTCAGGGCTCTGCTCTGCTCTGCTCTTTAATTTCCGCGTTGCTTCCCTCCCCCGCTTTTCCCGCTTGAAGAGGGGGAGTGCTTCACGCAGACGACGCGGAGGCGGGGGCGCTTCGGCTTCCGCTTTTTTTTGCTTTAACTCGGAGAGGAATCGCGCCGCAGTTCGCCGGGGGATTTTCCGGCGGGTCTCGGAGCCGGGAGAGTGTAGTCGTGGTGGTGGTGGGCTAGTGGTGAACTCGTCGTCGACGTCGCGGCCGAGTCGAGTTCGAGACCGTGACTTGTGTGATGAATGGTGTCGCGGTCGGACGACGCGGGGGTGACCTGACCTGACCTAACGAGCCCAACTGCTCGATCGAACCGGCGCGATTGGCTCGGTGTCTCCGTCACGCGTACGTGCTGGGTGCGTGGCACGCGCGACGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa02LNT0148600.3 | 2 | 4195712 | A | G |
| Osa02LNT0148600.3 | 2 | 4195630 | T | C |
| Osa02LNT0148600.3 | 2 | 4195661 | A | G |
| Osa02LNT0148600.3 | 2 | 4197348 | T | C |
| Osa02LNT0148600.3 | 2 | 4197505 | A | G |
| Osa02LNT0148600.3 | 2 | 4200468 | G | T |
| Osa02LNT0148600.3 | 2 | 4202154 | T | C |
| Osa02LNT0148600.3 | 2 | 4203125 | A | G |
| Osa02LNT0148600.3 | 2 | 4203235 | T | A |
| Osa02LNT0148600.3 | 2 | 4204599 | G | A |
| Osa02LNT0148600.3 | 2 | 4205198 | A | G |
| Osa02LNT0148600.3 | 2 | 4205243 | T | C |
| Osa02LNT0148600.3 | 2 | 4205616 | A | G |
| Osa02LNT0148600.3 | 2 | 4207645 | A | T |
| Osa02LNT0148600.3 | 2 | 4207950 | A | G |
| Osa02LNT0148600.3 | 2 | 4208720 | G | A |
| Osa02LNT0148600.3 | 2 | 4202062 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa02LNT0148600.3 | osa-miR5795 | Translation | 3.5 | 23.427 | 1 | 22 |
| Osa02LNT0148600.3 | osa-miR156b-3p | Cleavage | 4.0 | 3.012 | 1 | 21 |
| Osa02LNT0148600.3 | osa-miR156b-3p | Cleavage | 5.0 | 3.783 | 1 | 21 |
| Osa02LNT0148600.3 | osa-miR319a-3p.2-3p | Translation | 4.5 | 20.442 | 1 | 20 |
| Osa02LNT0148600.3 | osa-miR319b | Translation | 4.5 | 20.442 | 1 | 20 |
| Osa02LNT0148600.3 | osa-miR160f-3p | Cleavage | 5.0 | 15.803 | 1 | 21 |
| Osa02LNT0148600.3 | osa-miR164d | Translation | 5.0 | 11.111 | 1 | 21 |
| Osa02LNT0148600.3 | osa-miR530-5p | Cleavage | 4.5 | 22.129 | 1 | 20 |
| Osa02LNT0148600.3 | osa-miR1431 | Cleavage | 4.5 | 9.096 | 1 | 21 |
| Osa02LNT0148600.3 | osa-miR1432-3p | Cleavage | 5.0 | 19.053 | 1 | 21 |
| Osa02LNT0148600.3 | osa-miR1871 | Translation | 4.5 | 16.534 | 1 | 24 |
| Osa02LNT0148600.3 | osa-miR2870 | Cleavage | 4.5 | 20.599 | 1 | 21 |
| Osa02LNT0148600.3 | osa-miR2863b | Cleavage | 5.0 | 8.979 | 1 | 21 |
| Osa02LNT0148600.3 | osa-miR2919 | Cleavage | 4.0 | 6.828 | 1 | 19 |
| Osa02LNT0148600.3 | osa-miR5077 | Cleavage | 4.0 | 20.967 | 1 | 19 |
| Osa02LNT0148600.3 | osa-miR5490 | Cleavage | 4.5 | 8.71 | 1 | 21 |
| Osa02LNT0148600.3 | osa-miR5499 | Cleavage | 4.5 | 15.762 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa02LNT0148600.3 | 2 | qWIJ-2 | Morphological trait | Seed | RM233A | RM8 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|---|---|---|---|---|---|---|
| Osa02LNT0148600.3 | osa-MIR2863b | 100.0 | 101 | 1 | 101 | 3.15e-48 | 187 |
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)