>Osa02LNT0150200.1

GGAAAAATCGAAGCTGCCTGATCTAAATTCTAATAGAGTTAAAAGAAGAACATTAGTTACATCTAAGCTGTTACACGAGCTAGCACGAGATGAGCTATGTCGCCCGACTGTTGTACAGACACTAGGCAAAACCACAGCGGGCTATTATAACTTATAATAGATCTCTCCCTCTACATACAACACGAGAGCAGGTAGGCGCACACGCTAAAGTGCTAAAAACTACAGCAGCCGACGAGCAGGGCAGGGGGGGTTTCGCTTCAAGATTGTTGGTCTCTGAAGAGGCGCCTCCGCTTGGAGGTTGGCTGCTTCTCCTCGGGCGTCTCCGCGACCACCATCTGGTCCTGCTGCATCACCAGGCCCCGGTTCCGGGTGAGCTTCCTGATAGGTGTTCTTTGCGCGCATAGCTCCGGTGGATCAGCCTGGTCATGATCTTCGGCGCAGGGGATGTTCTCGGGGTTCCTGTGTGGCATCAGTTCTTCCCCGTCCGGAACGACTTCTTGCATAAGCTTCCAGTCTTTGAAATCAAATCTGAAAACAAAATGGCTGTAGGAGACTTCTCCTGAGGCTATCGCACTAGCAGCAGGAGCATTTCTAGGATAGACTATATGATGCCCGTTGTCATCTATGTTTATTGCCACCCTGCCATCTTTAACTAGGAAGGACAGTGCAAAAACGTTCTCAACAGTTTGGGCAAAAGAACGCCTGTTCAAAACAATGTTCTCCAGCCTTGCCCTTTTATTCCTCCTCAGGATATCAAATATGACAGACACATTCCTATCAGTGTCTGTCTTTACTCCCTCCAAAGATTCAGCAAGCTGTTCAGGACGAGCATTTTCCGTTGGCCTCGCAGTCCGTTTTCTATTGGCAACCACAGCCTTCCGTTGTTTTACTTCTGTATTCATGGGTCCAAGCATAGTGCAGCATCCAGGTGCAGCCCTGAAGACATGGGACACAGAAAGCCCAACATCCCCCCAGCGCAATGAGGCAGCCTCAGAATCAAGGCCCCCTGATTGCCCAAATTTCTTCAGCATGGCTGTTACGAAATCAGAGGGAGTGATTCCTTCACTTGACTGAGACCTAACGGATGTTACCAAAGTGTTTGCAATGTCCAACAGAGTTTCTGCATCAGCTATTTGCTCCCTAGGCCTCTGCACGAGCTCGTGCAGGCAGTCCACCTGCGTGATGATGGCGGCGAACGTGTCGGAGCCCGCCCTCGCCATGTCATCCTTCTCATCGCTGATGAGATTCTTCACGGCGAGGTACCGCGACCGGAGCAGCCGCCGCTCCGCAACCCCCTGCTGCTGCTGCCTCCCGCCGCCGCCGCTGCTGCCCTCCGCCATCGGGGACCGACCTGGCGCTCCCAAACCCTAATCCCCTCCCCCCAGATCTCCGAATCCCCAACGCGCTCGCCCCGGCGGCCTCGACTCGAGCCCCGATCGGCGAAGCGAGCGCGAGCGCGAGAGGGAAAATTTTGGGCGAAATTTCGTGGGGGGGAAGCAGCCGGCGGAGGAGGAGAGGGGAGGCGCGGATTTGAAAGCCCCTGC

Explanation	CPC Score
noncoding (weak)	-0.711235

Transcript ID	Chromosome	Locus	Ref	Alt
Osa02LNT0150200.1	2	5254587	G	A
Osa02LNT0150200.1	2	5256665	C	T
Osa02LNT0150200.1	2	5256865	T	C
Osa02LNT0150200.1	2	5257052	G	A
Osa02LNT0150200.1	2	5254616	A	G

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa02LNT0150200.1	osa-miR160f-5p	Cleavage	4.5	15.215	1	21
Osa02LNT0150200.1	osa-miR166g-5p	Translation	4.0	15.357	1	21
Osa02LNT0150200.1	osa-miR2925	Cleavage	4.5	24.415	1	19
Osa02LNT0150200.1	osa-miR5506	Cleavage	4.5	18.6	1	21
Osa02LNT0150200.1	osa-miR5507	Translation	4.0	23.116	1	21
Osa02LNT0150200.1	osa-miR5510	Cleavage	4.5	22.276	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa02LNT0150200.1	2	qWIJ-2	Morphological trait	Seed	RM233A	RM8

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus