>Osa02LNT0150300.1

CAATATTTATATTTTATTTTAGGATGGAAATAGTAATTACTTGAATAACTCCGTATATATATACTATTTGTATGATAAAGAAACATAATGGCGAGTGACTCTTTTAATATGGATCTAATAACATTCATTTTGTGTTATAAAAATTCACACTAATAGGATGATTGTTGCTCAAACTTTTGTCCTAACAAAATAAAATACTTGTTAGAACCTCATTGGTTGCTCATACTCTCTAATAAACCAAAACGGCTTATTAGGGAATAAAAAATAATTTATAGTTAAAACTTTTAGGGTGAATAGCCAGTTCAGTCCTTCAATTTTTGTTCATGAGTCGAATTAGTCCTTCATGTTTTATAATGTCCAACCAAGACCCTAAAAATTATCATGCGGCTTAATATAGTCCTTAGAGCCACTTAAAACACCACGTGGACATGCCACGTCATTCGTGCATGTAAGATAACATTTAAATGTCCATTTTAACCTTCAATTTTCTATCAAATAAAGAAAAGAAAAACAAGAAGAAGCAATCATAAAACAAAGAAAAATGTTAATTTTTTTTATCTATCAATGCTACATATTTTTGCC

Explanation	CPC Score
noncoding	-1.25164

Transcript ID	Chromosome	Locus	Ref	Alt
Osa02LNT0150300.1	2	5322881	A	G
Osa02LNT0150300.1	2	5323083	A	G
Osa02LNT0150300.1	2	5323179	G	A
Osa02LNT0150300.1	2	5323271	A	G

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts
Osa02LNT0150300.1	DTM_#DNAt_MULE_japo_Os0301	Chr2	.	5323116	5323670	294

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa02LNT0150300.1	osa-miR7692-3p	Cleavage	3.5	19.724	1	24

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa02LNT0150300.1	2	qPH-2	Morphological trait	Dwarf	RG324	RG83
Osa02LNT0150300.1	2	qWIJ-2	Morphological trait	Seed	RM233A	RM8
Osa02LNT0150300.1	2	nan	Resistance or Tolerance	Drought tolerance	RG83	RG171

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus