© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0012200.1
CTGCATGTGATAGTTAATTCCACCTTTATGAACCCTATTTTGCCAACTGACAAGACAGTTCAGTCATGTTGACAAATGTTTTCCTCACAAGTTAGATGACACTTTGTTTGCCAATGATGATACTACAAACCAGCAATACTTTGCTAACAGAATGAACTAGCTACCAAATTCAACTAGAATTCTGAATCATTGCTTCAATTGCTTTGTTGGCCTTAATCAGTTCCCCTTTTAAGCAAAGTGAAGCGATTGCTGGATAATATGTGTCAAAGTCATCATGGAAAGAATTCCGTAGCAAATTATCATAGTAAATATCAGTATCATCACTTGGTGTGCATAAATTCTCAGCTCCATCTATTGTGGGTTGAACTGTGCCTTCAGAAATTCCATGAAGACAGTTGCTAGAAACACCATAAGTAGTTGAACATAAAACTTGTCCAGGATTATCCATATTACGATCATAAGCCACAGGTGTCTCTACGTTCTTCAGGTGACTAAGCGTGCTACAATTATTAGAATCTGAAGAGGATACAGACATGAGCGCCACTTCATTTAGGATAGTCACGACCTCATCAATCCTCCCTTGCTCACAGGCAGAAAATAGAAGGCCAACAAAAGATTCTGCTTGGATCTTATCCCCAACACTGTTTATGAACTCTGCAACTTCTTTGCACTGAAACATCTCTCTCAAGATGCTCCTAGATTCTTCCATTCTTCCTTTTGCATAGAGTCCTTTGACCAGGCTCATGAAGCCAACAAAATCTGGAACCATCTCCTTATGATAGTATTCACTAAAGAAGCCTAATGCTGATTCAATGTCACCTTTTAGGCAGTGTCCATTAATTATTGCACCAATTGTAATAGCGTCTGGGAATAGAAATATTTCCTCAAAATGTGATATAAGCTCCAGTGCTTTCTCAGTTAACCCGTAGTTACAATAACCACTTATTAGCAAGTTGTAAACACGTGTAGTGGGTTTGATACCCTTGGTGGACATTTTCTGAAACAACTCATGAGCGTCATCCAAAAAACCTTCTCTGCACAAAGCAGCTATAAGTATAGAGTAAGTTACCAGTGTCGGAAGCACTTCACTGCTTTCTAGGTAGTCAAATAGCCGGAATGCTTCAGTAAGGCATCCCTGCTGGCACAAACCATTCAGAACAGAGTTATGGATGACAATGTTTGGCTGAATCCCTTCTTCTTTCATGCTTTCGCATAGGTCTAATGCCTTCTCAAGATAACCACTTTTACAAAGGCCTTCCACTAATATGGAGTACATGGCAAGATCCACTGAATAACCATTTTGTTCAGCTTCCTTCAAAAAGTTGCATGCATCCAGAATTCTACCTTCCCTCTTTAGTGTGTATACAGCTTCTCTTAGAACACTGACAGGAACACGGCCATTGTTCATGTAATTGGAAAACCCAATAGCTTCACCAACACTGTTCTTGCTGAGGTGGCAAGATAGCATATTAATCATTCTAGGTTCATCCAGGCCATGAATTTTAATGAACTGACTTAATAATGGCTGGATGGTCTGTTCATGACCATTTCGGAGCAAGCATTTGAGTAGCCTGTAGCATGTTTTGCTAGTTACAGTAAATGATTTCATTCTTAGAAGCTTGTAAACATCCAATGCTCCTTGGTAGCAATCTCTTGTGCTTAAGAAAGCGGAAGCATAATTACATAGAGATGAAAATAAGTCAATTTCAGATCCATCCACCTTAAGAATGAAATTCAGCACGCCATGTTCACCGCCTTCTTTAAAGTGTGTATGGATCAACTTCTTGTAAGTACAGGAATCAGGCCTTAAATTTCTTTGGATAAGATCATTAAAAATCTGCTCAGCCATGTTTACCTTTCCTCCATTACACAATGCTATAATCAGGCAATTGTGTACTATTGTAGAGGAGAACAAGATGTCTTCTTTGTAATCATCAAACAACTGCAGTGCCCTGTCAGTTTCTCCAAGTTTACACATCATGTCAATAACTGTATGATATGTGACAATATTAGGCCTTAATCTCATCTCGGGCATTCTAAGAAACAAGCTGCAGGCATCATCCACCTTCTTAATCATAAATAATGCTTTGATAAGTACATTGCATGTGACAACATCAATTGTAACACCGCTGCTCTCAAGCCTACCTTTTATTGCCATTACACCAGTTGCATCTTCTACCTTAATGTGACCATGTAACAGCGTGCTATATGTGAAGTTATCAGCAGCAATACCTTCATATATTTCAACAGCCTTCTTGGTGTGACCAACCTTACATAGACCATTTATTACTGAATTGTATGTTACGATTCCAATCTTTATCCCCTTTTTATCCATCTCTTCAAGCAAAGAGAAAGCCCTATCCAAATATCCCTTTTTGCACAAATTGTCAATCAAAATTGAGTAAACATATTCATCCACCACCACTCCTGTCTGTTCCAGTTTCCTCACTATAGAAAAAGCATCATCCAACCTGTTTCTCTTGCAGAAACCACCAATCAATGATGTATAAGTGATCAAATTCGGCTTAGCATCCCTTCGGTTCATCTCATCCAAGAATCCCATCACTTTTTCCACACTACGTTCTCTGCAAAGTCCATCAATAACAGTAGTATAACTAACTACATCAGCTGCAATGCCCTTATCTAACATCACCCGATGCTCACGGAGCCCTTTCATCAATAACCCGCTACTCATGTATCCATGAACCAAGCTGCCATATAAAACAGCATCACCAACCAACCCCTTCCCTTCCATCTCCCTTACCAATTGTGCTGCCTCAGTAGTTCTCCCTACACGGCCAAGCACATCGACAAAAGCGGTTAATGTGATCAAGCCTGGCTCAAATCCATTGAACTCTCTCCTCACCCTCCTATAGAATTCCAGCCCATCCCCAGCCTTCCCGACCTTGGAGAAGCCTGAAATGATCACGCTGCAAACACGATCATCCACCTGACACCCCGCTGCAGCCATTACGTCGAACACCTTGAGCGCGGTCTCCATGTCACCGCGGGCACACAGCATCGTCAGGGCCACACGATACGTGGACGGAGAAAACACGAGCCCGCACTCCTCTACGCCGGCGGAGAGCACCTCCAGCGCGCGGCGAGCATCGCCGCGCACCGCGCAGGCCCGGCGGAGCAGCGCGTCCCAGAGGCGGCGCGCGGAGGAGGTTGCCGGGCCGGCGAGCGCGAGGCGCGCTGCCGCGTCGCGCGGACGGGAAGAATCTAGAAGCGCCGAGGCGACCAGGAGGTGGGTGCGCGCGGTGGGGCGCACGGAGTTGGCGACCGCCTGCGAGGCGAGCGCGCCGACGAGGCGGTGCCTCCGCCGGCGGAGGAGCGCCGCCAGTAGGATGTCCACGCGGCGCGGCGTGACGGCCCTTCCGAGCTTGACCAGCGACGGGAGCGGCGGTGGTGGTCGGGGCTCGCCGCCGGCGAGCGGCAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0012200.1 | 1 | 8921803 | A | T |
| Osa01LNT0012200.1 | 1 | 8921874 | A | G |
| Osa01LNT0012200.1 | 1 | 8922847 | T | A |
| Osa01LNT0012200.1 | 1 | 8923696 | C | T |
| Osa01LNT0012200.1 | 1 | 8922785 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0012200.1 | osa-miR5528 | Cleavage | 4.5 | 14.022 | 1 | 21 |
| Osa01LNT0012200.1 | osa-miR5825 | Translation | 3.5 | 15.684 | 1 | 24 |
| Osa01LNT0012200.1 | osa-miR396c-3p | Translation | 4.5 | 18.164 | 1 | 21 |
| Osa01LNT0012200.1 | osa-miR396c-3p | Cleavage | 5.0 | 18.321 | 1 | 21 |
| Osa01LNT0012200.1 | osa-miR438 | Cleavage | 5.0 | 17.471 | 1 | 21 |
| Osa01LNT0012200.1 | osa-miR395o | Cleavage | 5.0 | 21.565 | 1 | 21 |
| Osa01LNT0012200.1 | osa-miR1425-3p | Cleavage | 4.5 | 19.219 | 1 | 21 |
| Osa01LNT0012200.1 | osa-miR1429-5p | Translation | 5.0 | 7.874 | 1 | 21 |
| Osa01LNT0012200.1 | osa-miR1881 | Cleavage | 5.0 | 14.405 | 1 | 24 |
| Osa01LNT0012200.1 | osa-miR2099-5p | Cleavage | 4.0 | 7.297 | 1 | 22 |
| Osa01LNT0012200.1 | osa-miR2105 | Translation | 4.5 | 8.568 | 1 | 20 |
| Osa01LNT0012200.1 | osa-miR2922 | Translation | 4.5 | 13.045 | 1 | 20 |
| Osa01LNT0012200.1 | osa-miR2928 | Cleavage | 3.5 | 22.723 | 1 | 20 |
| Osa01LNT0012200.1 | osa-miR1862f | Cleavage | 4.0 | 13.966 | 1 | 20 |
| Osa01LNT0012200.1 | osa-miR1862g | Cleavage | 4.0 | 13.966 | 1 | 20 |
| Osa01LNT0012200.1 | osa-miR5493 | Translation | 5.0 | 15.546 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0012200.1 | 1 | An9 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0012200.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0012200.1 | 1 | nan | Morphological trait | Root | RM7383 | RM23 |
| Osa01LNT0012200.1 | 1 | nan | Resistance or Tolerance | Insect resistance | RM576 | RM3412 |
| Osa01LNT0012200.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0012200.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0012200.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0012200.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)